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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
243.8
nTPM
Monaco:
18.7
nTPM
Schmiedel:
114.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
243.8
HPA sample
nTPM
gdT-cell nTPM: 162.8
Samples: 6
Max nTPM: 220.4
Min nTPM: 107.9
P10809_1007
107.9
P10809_1022
163.6
P10809_1041
220.4
P10809_1060
163.6
P10809_1077
138.7
P10809_1098
182.4
MAIT T-cell nTPM: 163.3
Samples: 6
Max nTPM: 223.6
Min nTPM: 88.1
P10809_1006
88.1
P10809_1024
147.1
P10809_1043
223.6
P10809_1062
187.6
P10809_1083
161.6
P10809_1097
171.8
Memory CD4 T-cell nTPM: 225.5
Samples: 6
Max nTPM: 301.0
Min nTPM: 133.4
P10809_1014
133.4
P10809_1026
301.0
P10809_1045
231.1
P10809_1064
236.1
P10809_1086
206.9
P10809_1113
244.4
Memory CD8 T-cell nTPM: 189.9
Samples: 5
Max nTPM: 217.8
Min nTPM: 114.4
P10809_1012
114.4
P10809_1027
216.3
P10809_1046
206.0
P10809_1065
194.8
P10809_1111
217.8
Naive CD4 T-cell nTPM: 215.6
Samples: 6
Max nTPM: 324.2
Min nTPM: 112.2
P10809_1015
112.2
P10809_1030
213.8
P10809_1049
324.2
P10809_1068
204.3
P10809_1085
207.4
P10809_1112
231.6
Naive CD8 T-cell nTPM: 197.8
Samples: 6
Max nTPM: 227.1
Min nTPM: 139.3
P10809_1016
139.3
P10809_1031
218.7
P10809_1050
216.5
P10809_1069
216.9
P10809_1087
168.3
P10809_1110
227.1
T-reg nTPM: 243.8
Samples: 6
Max nTPM: 307.2
Min nTPM: 148.1
P10809_1018
148.1
P10809_1037
201.1
P10809_1056
307.2
P10809_1075
244.1
P10809_1094
264.4
P10809_1106
297.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
18.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 12.9
Samples: 4
Max nTPM: 16.3
Min nTPM: 5.3
RHH5202_R3573
5.3
RHH5230_R3602
15.5
RHH5259_R3631
14.5
RHH5288_R3660
16.3
Effector memory CD8 T-cell nTPM: 9.6
Samples: 4
Max nTPM: 12.0
Min nTPM: 5.7
RHH5203_R3574
9.0
RHH5231_R3603
5.7
RHH5260_R3632
12.0
RHH5289_R3661
11.7
MAIT T-cell nTPM: 11.7
Samples: 4
Max nTPM: 16.3
Min nTPM: 7.4
RHH5233_R3605
9.9
RHH5205_R3576
7.4
RHH5262_R3634
13.0
RHH5297_R3663
16.3
Memory CD4 T-cell TFH nTPM: 9.8
Samples: 4
Max nTPM: 18.7
Min nTPM: 4.3
RHH5300_R3666
11.6
RHH5236_R3608
18.7
RHH5265_R3637
4.5
RHH5208_R3579
4.3
Memory CD4 T-cell Th1 nTPM: 18.7
Samples: 4
Max nTPM: 31.5
Min nTPM: 5.0
RHH5210_R3581
5.0
RHH5302_R3668
21.1
RHH5238_R3610
31.5
RHH5267_R3639
17.2
Memory CD4 T-cell Th1/Th17 nTPM: 11.6
Samples: 4
Max nTPM: 14.2
Min nTPM: 8.6
RHH5303_R3669
11.5
RHH5211_R3582
8.6
RHH5239_R3611
14.2
RHH5268_R3640
11.9
Memory CD4 T-cell Th17 nTPM: 7.6
Samples: 4
Max nTPM: 7.9
Min nTPM: 7.2
RHH5304_R3670
7.9
RHH5212_R3583
7.5
RHH5240_R3612
7.6
RHH5269_R3641
7.2
Memory CD4 T-cell Th2 nTPM: 11.2
Samples: 4
Max nTPM: 14.8
Min nTPM: 7.3
RHH5305_R3671
14.8
RHH5213_R3584
13.0
RHH5241_R3613
7.3
RHH5270_R3642
9.8
Naive CD4 T-cell nTPM: 14.3
Samples: 4
Max nTPM: 26.4
Min nTPM: 4.1
RHH5306_R3672
14.8
RHH5214_R3585
26.4
RHH5242_R3614
4.1
RHH5271_R3643
11.7
Naive CD8 T-cell nTPM: 11.7
Samples: 4
Max nTPM: 22.0
Min nTPM: 2.6
RHH5201_R3572
2.6
RHH5229_R3601
22.0
RHH5258_R3630
6.6
RHH5287_R3659
15.5
Non-Vd2 gdTCR nTPM: 6.7
Samples: 4
Max nTPM: 13.3
Min nTPM: 0.0
RHH5235_R3607
13.3
RHH5264_R3636
0.0
RHH5207_R3578
5.6
RHH5299_R3665
8.0
T-reg nTPM: 11.4
Samples: 4
Max nTPM: 14.2
Min nTPM: 7.3
RHH5301_R3667
12.1
RHH5237_R3609
14.2
RHH5266_R3638
7.3
RHH5209_R3580
12.0
Terminal effector memory CD4 T-cell nTPM: 6.4
Samples: 2
Max nTPM: 8.4
Min nTPM: 4.3
RHH5243_R3615
8.4
RHH5272_R3644
4.3
Terminal effector memory CD8 T-cell nTPM: 16.5
Samples: 4
Max nTPM: 28.7
Min nTPM: 3.2
RHH5232_R3604
3.2
RHH5204_R3575
28.7
RHH5261_R3633
25.1
RHH5296_R3662
8.9
Vd2 gdTCR nTPM: 17.5
Samples: 4
Max nTPM: 40.9
Min nTPM: 6.4
RHH5234_R3606
6.4
RHH5206_R3577
40.9
RHH5263_R3635
12.0
RHH5298_R3664
10.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
