HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:9.7 nTPM
HPA Brain:85.2 nTPM
GTEx:9.7 nTPM
FANTOM5:2.7 Scaled Tags Per Million
Pig:69.8 nTPM
Mouse:36.9 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005445
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 85.2
Sample id Sample description nTPM
Hippocampus
nTPM: 68.8
2529 Female, age 94, left hemisphere 81.8
2621 Female, age 67, right hemisphere 72.4
1911 Female, age 85, right hemisphere 71.4
1898 Male, age 80, left hemisphere 68.4
2148 Female, age 91, left hemisphere 66.1
1855 Male, age 76, left hemisphere 52.5
Dentate gyrus
nTPM: 69.4
2530 Female, age 94, left hemisphere 82.3
1927 Female, age 91, both hemispheres 81.6
2531 Female, age 67, both hemispheres 76.6
2246 Female, age 85, both hemispheres 65.0
2010 Male, age 76, both hemispheres 56.9
2528 Male, age 74, both hemispheres 54.2
Entorhinal gyrus
nTPM: 85.2
2686 Male, age 75, right hemisphere 104.0
2613 Female, age 94, left hemisphere 91.0
1938 Female, age 85, left hemisphere 86.1
2117 Female, age 91, right hemisphere 85.5
2764 Male, age 80, right hemisphere 79.8
1787 Male, age 76, left hemisphere 65.1
Hippocampus, CA1
nTPM: 63.9
2749 Male, age 80, left hemisphere 77.7
1873 Female, age 85, both hemispheres 68.2
2082 Female, age 91, right hemisphere 64.8
2527 Male, age 74, both hemispheres 59.8
2045 Male, age 76, both hemispheres 49.0
Hippocampus, CA2
nTPM: 75.6
1963 Male, age 80, left hemisphere 114.1
1892 Male, age 76, both hemispheres 76.4
2437 Female, age 94, left hemisphere 72.5
2113 Female, age 91, right hemisphere 70.6
1940 Female, age 85, left hemisphere 67.1
2249 Male, age 74, both hemispheres 53.0
Hippocampus, CA3
nTPM: 67.1
2137 Male, age 80, left hemisphere 91.7
1891 Female, age 85, both hemispheres 77.9
1867 Male, age 76, both hemispheres 71.0
2861 Female, age 67, both hemispheres 62.4
2620 Female, age 94, left hemisphere 55.5
2436 Male, age 74, both hemispheres 43.9
Parahippocampal cortex
nTPM: 70.3
1990 Female, age 91, right hemisphere 84.7
1850 Male, age 80, both hemispheres 82.8
2532 Female, age 72, left hemisphere 79.2
2245 Female, age 91, both hemispheres 78.8
2692 Male, age 74, both hemispheres 77.8
1933 Female, age 85, both hemispheres 68.8
2622 Female, age 67, right hemisphere 62.1
2693 Female, age 94, both hemispheres 59.9
2018 Male, age 76, both hemispheres 58.5
2250 Female, age 67, right hemisphere 50.0
Perirhinal gyrus
nTPM: 71.2
1847 Female, age 91, left hemisphere 80.3
1794 Male, age 80, right hemisphere 73.7
1841 Female, age 85, right hemisphere 70.4
2848 Male, age 76, right hemisphere 70.4
2521 Female, age 94, right hemisphere 61.3
Subiculum
nTPM: 73.9
2438 Female, age 94, left hemisphere 87.1
1901 Male, age 80, both hemispheres 85.6
1977 Female, age 85, both hemispheres 82.9
2042 Male, age 76, both hemispheres 66.6
2619 Male, age 74, both hemispheres 61.8
2729 Female, age 91, right hemisphere 59.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.7
Samples: 197

Max nTPM: 21.0
Min nTPM: 3.3
Std nTPM: 3.1
Median nTPM: 9.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 21.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 20.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 20.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 18.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 18.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 17.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 17.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 16.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 16.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 16.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 16.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 2.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 2.7
FF:10169-103B7 60 years, female 3.1
FF:10153-102I9 76 years, female 2.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 69.8
Pig sample Sample description nTPM
Subiculum
nTPM: 59.6
Samples: 4

Max nTPM: 85.2
Min nTPM: 44.3
Sample A Female 85.2
Sample B Female 57.5
Sample C Male 51.3
Sample D Male 44.3
Dorsal hippocampus
nTPM: 55.2
Samples: 4

Max nTPM: 62.6
Min nTPM: 48.1
Sample A Female 59.4
Sample B Female 62.6
Sample C Male 50.6
Sample D Male 48.1
Entorhinal cortex
nTPM: 69.8
Samples: 4

Max nTPM: 79.9
Min nTPM: 61.6
Sample A Female 66.0
Sample B Female 79.9
Sample C Male 71.8
Sample D Male 61.6
Ventral hippocampus
nTPM: 54.3
Samples: 4

Max nTPM: 65.3
Min nTPM: 43.6
Sample A Female 43.6
Sample B Female 49.8
Sample C Male 65.3
Sample D Male 58.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.9
Samples: 4

Max nTPM: 38.9
Min nTPM: 35.0
Sample A Male 38.9
Sample B Male 35.0
Sample C Female 35.2
Sample D Female 38.6
Hippocampal formation
nTPM: 32.8
Samples: 4

Max nTPM: 36.4
Min nTPM: 30.0
Sample A Male 30.0
Sample B Male 34.0
Sample C Female 36.4
Sample D Female 30.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
2699 Antisense, RP_Baylor_103269, Mouse strain C57BL/6J (56 days, male) 3.0
2700 Antisense, RP_Baylor_103269, Mouse strain C57BL/6J (56 days, male) 1.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org