HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:46.1 nTPM
HPA Brain:59.4 nTPM
GTEx:46.1 nTPM
FANTOM5:196.9 Scaled Tags Per Million
Pig:73.3 nTPM
Mouse:38.6 nTPM
Allen mouse:15.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067045Antibody CAB070846
Glial cells LowNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.4
Sample id Sample description nTPM
Hippocampus
nTPM: 51.3
1898 Male, age 80, left hemisphere 70.9
1855 Male, age 76, left hemisphere 54.1
2621 Female, age 67, right hemisphere 48.3
2529 Female, age 94, left hemisphere 45.9
2148 Female, age 91, left hemisphere 45.5
1911 Female, age 85, right hemisphere 42.8
Dentate gyrus
nTPM: 51.2
2010 Male, age 76, both hemispheres 64.2
1927 Female, age 91, both hemispheres 55.0
2531 Female, age 67, both hemispheres 50.9
2246 Female, age 85, both hemispheres 46.1
2528 Male, age 74, both hemispheres 46.0
2530 Female, age 94, left hemisphere 45.4
Entorhinal gyrus
nTPM: 51.6
2764 Male, age 80, right hemisphere 59.7
2613 Female, age 94, left hemisphere 56.5
2686 Male, age 75, right hemisphere 54.7
1938 Female, age 85, left hemisphere 52.8
1787 Male, age 76, left hemisphere 47.2
2117 Female, age 91, right hemisphere 38.5
Hippocampus, CA1
nTPM: 59.4
2749 Male, age 80, left hemisphere 88.8
1873 Female, age 85, both hemispheres 56.9
2527 Male, age 74, both hemispheres 53.8
2082 Female, age 91, right hemisphere 49.5
2045 Male, age 76, both hemispheres 47.9
Hippocampus, CA2
nTPM: 53.7
1892 Male, age 76, both hemispheres 73.5
1963 Male, age 80, left hemisphere 68.7
2113 Female, age 91, right hemisphere 48.4
2249 Male, age 74, both hemispheres 48.3
1940 Female, age 85, left hemisphere 41.8
2437 Female, age 94, left hemisphere 41.8
Hippocampus, CA3
nTPM: 54.8
2137 Male, age 80, left hemisphere 67.0
1867 Male, age 76, both hemispheres 65.5
2620 Female, age 94, left hemisphere 56.6
2436 Male, age 74, both hemispheres 51.3
1891 Female, age 85, both hemispheres 44.8
2861 Female, age 67, both hemispheres 43.8
Parahippocampal cortex
nTPM: 51.7
1850 Male, age 80, both hemispheres 64.3
2018 Male, age 76, both hemispheres 53.8
2245 Female, age 91, both hemispheres 53.2
1933 Female, age 85, both hemispheres 52.5
2693 Female, age 94, both hemispheres 52.4
2622 Female, age 67, right hemisphere 50.8
2692 Male, age 74, both hemispheres 49.0
1990 Female, age 91, right hemisphere 47.9
2532 Female, age 72, left hemisphere 47.4
2250 Female, age 67, right hemisphere 45.8
Perirhinal gyrus
nTPM: 57.9
1847 Female, age 91, left hemisphere 78.3
1794 Male, age 80, right hemisphere 64.3
1841 Female, age 85, right hemisphere 53.0
2848 Male, age 76, right hemisphere 49.1
2521 Female, age 94, right hemisphere 44.9
Subiculum
nTPM: 46.8
1901 Male, age 80, both hemispheres 53.5
1977 Female, age 85, both hemispheres 48.1
2042 Male, age 76, both hemispheres 48.0
2619 Male, age 74, both hemispheres 46.7
2438 Female, age 94, left hemisphere 43.8
2729 Female, age 91, right hemisphere 41.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.1
Samples: 197

Max nTPM: 94.9
Min nTPM: 14.9
Std nTPM: 16.6
Median nTPM: 43.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 94.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 92.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 91.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 90.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 89.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 84.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 83.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 81.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 81.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 79.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 78.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 196.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 196.9
FF:10169-103B7 60 years, female 276.2
FF:10153-102I9 76 years, female 117.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 73.3
Pig sample Sample description nTPM
Subiculum
nTPM: 65.8
Samples: 4

Max nTPM: 86.4
Min nTPM: 57.0
Sample A Female 86.4
Sample B Female 58.5
Sample C Male 61.2
Sample D Male 57.0
Dorsal hippocampus
nTPM: 73.3
Samples: 4

Max nTPM: 100.7
Min nTPM: 51.1
Sample A Female 100.7
Sample B Female 68.6
Sample C Male 72.8
Sample D Male 51.1
Entorhinal cortex
nTPM: 70.5
Samples: 4

Max nTPM: 81.0
Min nTPM: 58.0
Sample A Female 71.9
Sample B Female 81.0
Sample C Male 71.0
Sample D Male 58.0
Ventral hippocampus
nTPM: 73.2
Samples: 4

Max nTPM: 93.2
Min nTPM: 51.5
Sample A Female 81.1
Sample B Female 51.5
Sample C Male 93.2
Sample D Male 66.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.4
Samples: 4

Max nTPM: 44.7
Min nTPM: 34.6
Sample A Male 34.6
Sample B Male 44.7
Sample C Female 36.6
Sample D Female 37.5
Hippocampal formation
nTPM: 38.6
Samples: 4

Max nTPM: 45.4
Min nTPM: 33.4
Sample A Male 33.4
Sample B Male 41.5
Sample C Female 34.0
Sample D Female 45.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.7
67881785 Antisense, RP_040923_01_A03, Mouse strain C57BL/6J (56 days, male) 17.7
74658173 Antisense, RP_060220_02_D01, Mouse strain C57BL/6J (56 days, male) 13.7

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