We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1309.2
nTPM
Monaco:
611.8
nTPM
Schmiedel:
12.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1309.2
HPA sample
nTPM
gdT-cell nTPM: 766.3
Samples: 6
Max nTPM: 1035.5
Min nTPM: 409.6
P10809_1007
409.6
P10809_1022
1035.5
P10809_1041
1016.9
P10809_1060
766.3
P10809_1077
588.4
P10809_1098
781.2
MAIT T-cell nTPM: 718.0
Samples: 6
Max nTPM: 941.3
Min nTPM: 429.8
P10809_1006
429.8
P10809_1024
822.9
P10809_1043
835.7
P10809_1062
730.8
P10809_1083
547.6
P10809_1097
941.3
Memory CD4 T-cell nTPM: 878.3
Samples: 6
Max nTPM: 1127.5
Min nTPM: 517.8
P10809_1014
517.8
P10809_1026
1057.8
P10809_1045
988.5
P10809_1064
918.9
P10809_1086
659.5
P10809_1113
1127.5
Memory CD8 T-cell nTPM: 851.3
Samples: 5
Max nTPM: 990.4
Min nTPM: 531.3
P10809_1012
531.3
P10809_1027
956.6
P10809_1046
932.7
P10809_1065
845.5
P10809_1111
990.4
Naive CD4 T-cell nTPM: 505.9
Samples: 6
Max nTPM: 677.3
Min nTPM: 248.4
P10809_1015
248.4
P10809_1030
508.1
P10809_1049
677.3
P10809_1068
469.8
P10809_1085
544.2
P10809_1112
587.7
Naive CD8 T-cell nTPM: 675.9
Samples: 6
Max nTPM: 825.6
Min nTPM: 371.7
P10809_1016
371.7
P10809_1031
724.2
P10809_1050
781.2
P10809_1069
825.6
P10809_1087
567.6
P10809_1110
784.8
T-reg nTPM: 1309.2
Samples: 6
Max nTPM: 1640.4
Min nTPM: 843.4
P10809_1018
843.4
P10809_1037
1252.3
P10809_1056
1624.7
P10809_1075
1133.9
P10809_1094
1360.4
P10809_1106
1640.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
611.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 424.8
Samples: 4
Max nTPM: 498.5
Min nTPM: 276.5
RHH5202_R3573
498.5
RHH5230_R3602
466.5
RHH5259_R3631
276.5
RHH5288_R3660
457.6
Effector memory CD8 T-cell nTPM: 579.9
Samples: 4
Max nTPM: 763.4
Min nTPM: 400.0
RHH5203_R3574
763.4
RHH5231_R3603
543.1
RHH5260_R3632
400.0
RHH5289_R3661
613.0
MAIT T-cell nTPM: 410.8
Samples: 4
Max nTPM: 443.4
Min nTPM: 352.1
RHH5233_R3605
443.4
RHH5205_R3576
421.5
RHH5262_R3634
426.1
RHH5297_R3663
352.1
Memory CD4 T-cell TFH nTPM: 611.8
Samples: 4
Max nTPM: 747.7
Min nTPM: 520.3
RHH5300_R3666
520.3
RHH5236_R3608
747.7
RHH5265_R3637
561.6
RHH5208_R3579
617.4
Memory CD4 T-cell Th1 nTPM: 410.9
Samples: 4
Max nTPM: 488.6
Min nTPM: 357.8
RHH5210_R3581
427.5
RHH5302_R3668
488.6
RHH5238_R3610
357.8
RHH5267_R3639
369.6
Memory CD4 T-cell Th1/Th17 nTPM: 464.9
Samples: 4
Max nTPM: 657.1
Min nTPM: 230.4
RHH5303_R3669
610.8
RHH5211_R3582
657.1
RHH5239_R3611
230.4
RHH5268_R3640
361.1
Memory CD4 T-cell Th17 nTPM: 448.2
Samples: 4
Max nTPM: 609.9
Min nTPM: 346.6
RHH5304_R3670
412.2
RHH5212_R3583
609.9
RHH5240_R3612
424.0
RHH5269_R3641
346.6
Memory CD4 T-cell Th2 nTPM: 506.0
Samples: 4
Max nTPM: 548.8
Min nTPM: 450.7
RHH5305_R3671
450.7
RHH5213_R3584
548.8
RHH5241_R3613
530.0
RHH5270_R3642
494.6
Naive CD4 T-cell nTPM: 247.3
Samples: 4
Max nTPM: 350.1
Min nTPM: 190.7
RHH5306_R3672
220.4
RHH5214_R3585
350.1
RHH5242_R3614
228.1
RHH5271_R3643
190.7
Naive CD8 T-cell nTPM: 351.1
Samples: 4
Max nTPM: 437.7
Min nTPM: 181.2
RHH5201_R3572
433.4
RHH5229_R3601
181.2
RHH5258_R3630
437.7
RHH5287_R3659
352.2
Non-Vd2 gdTCR nTPM: 470.8
Samples: 4
Max nTPM: 565.3
Min nTPM: 343.3
RHH5235_R3607
343.3
RHH5264_R3636
500.9
RHH5207_R3578
565.3
RHH5299_R3665
473.5
T-reg nTPM: 446.0
Samples: 4
Max nTPM: 611.4
Min nTPM: 322.6
RHH5301_R3667
428.4
RHH5237_R3609
611.4
RHH5266_R3638
322.6
RHH5209_R3580
421.6
Terminal effector memory CD4 T-cell nTPM: 379.2
Samples: 2
Max nTPM: 425.7
Min nTPM: 332.7
RHH5243_R3615
332.7
RHH5272_R3644
425.7
Terminal effector memory CD8 T-cell nTPM: 486.9
Samples: 4
Max nTPM: 580.6
Min nTPM: 349.9
RHH5232_R3604
545.0
RHH5204_R3575
580.6
RHH5261_R3633
349.9
RHH5296_R3662
472.1
Vd2 gdTCR nTPM: 385.5
Samples: 4
Max nTPM: 497.3
Min nTPM: 295.3
RHH5234_R3606
418.4
RHH5206_R3577
497.3
RHH5263_R3635
295.3
RHH5298_R3664
331.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
