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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
182.9
nTPM
Monaco:
93.0
nTPM
Schmiedel:
76.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
182.9
HPA sample
nTPM
gdT-cell nTPM: 148.7
Samples: 6
Max nTPM: 199.1
Min nTPM: 104.6
P10809_1007
141.1
P10809_1022
185.4
P10809_1041
199.1
P10809_1060
104.6
P10809_1077
106.2
P10809_1098
155.9
MAIT T-cell nTPM: 182.9
Samples: 6
Max nTPM: 260.9
Min nTPM: 128.8
P10809_1006
128.8
P10809_1024
181.9
P10809_1043
260.9
P10809_1062
143.7
P10809_1083
140.5
P10809_1097
241.5
Memory CD4 T-cell nTPM: 158.8
Samples: 6
Max nTPM: 194.1
Min nTPM: 113.9
P10809_1014
128.6
P10809_1026
194.1
P10809_1045
191.0
P10809_1064
135.2
P10809_1086
113.9
P10809_1113
189.9
Memory CD8 T-cell nTPM: 154.4
Samples: 5
Max nTPM: 194.6
Min nTPM: 114.7
P10809_1012
126.0
P10809_1027
152.2
P10809_1046
194.6
P10809_1065
114.7
P10809_1111
184.6
Naive CD4 T-cell nTPM: 170.3
Samples: 6
Max nTPM: 239.7
Min nTPM: 116.8
P10809_1015
116.8
P10809_1030
209.1
P10809_1049
239.7
P10809_1068
150.0
P10809_1085
118.5
P10809_1112
187.5
Naive CD8 T-cell nTPM: 172.0
Samples: 6
Max nTPM: 230.2
Min nTPM: 99.3
P10809_1016
162.6
P10809_1031
230.2
P10809_1050
185.8
P10809_1069
153.5
P10809_1087
99.3
P10809_1110
200.5
T-reg nTPM: 167.4
Samples: 6
Max nTPM: 210.3
Min nTPM: 123.9
P10809_1018
131.8
P10809_1037
184.1
P10809_1056
198.8
P10809_1075
155.5
P10809_1094
123.9
P10809_1106
210.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
93.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 73.5
Samples: 4
Max nTPM: 90.8
Min nTPM: 64.1
RHH5202_R3573
64.1
RHH5230_R3602
71.1
RHH5259_R3631
67.9
RHH5288_R3660
90.8
Effector memory CD8 T-cell nTPM: 63.3
Samples: 4
Max nTPM: 74.7
Min nTPM: 56.3
RHH5203_R3574
61.0
RHH5231_R3603
74.7
RHH5260_R3632
61.1
RHH5289_R3661
56.3
MAIT T-cell nTPM: 80.0
Samples: 4
Max nTPM: 137.3
Min nTPM: 48.0
RHH5233_R3605
68.2
RHH5205_R3576
48.0
RHH5262_R3634
66.5
RHH5297_R3663
137.3
Memory CD4 T-cell TFH nTPM: 83.8
Samples: 4
Max nTPM: 104.8
Min nTPM: 61.9
RHH5300_R3666
94.9
RHH5236_R3608
104.8
RHH5265_R3637
73.6
RHH5208_R3579
61.9
Memory CD4 T-cell Th1 nTPM: 90.4
Samples: 4
Max nTPM: 125.1
Min nTPM: 61.6
RHH5210_R3581
104.0
RHH5302_R3668
125.1
RHH5238_R3610
71.0
RHH5267_R3639
61.6
Memory CD4 T-cell Th1/Th17 nTPM: 82.4
Samples: 4
Max nTPM: 113.6
Min nTPM: 60.1
RHH5303_R3669
90.3
RHH5211_R3582
113.6
RHH5239_R3611
65.7
RHH5268_R3640
60.1
Memory CD4 T-cell Th17 nTPM: 64.4
Samples: 4
Max nTPM: 96.7
Min nTPM: 46.3
RHH5304_R3670
67.2
RHH5212_R3583
96.7
RHH5240_R3612
46.3
RHH5269_R3641
47.3
Memory CD4 T-cell Th2 nTPM: 83.1
Samples: 4
Max nTPM: 101.4
Min nTPM: 60.3
RHH5305_R3671
100.6
RHH5213_R3584
70.0
RHH5241_R3613
101.4
RHH5270_R3642
60.3
Naive CD4 T-cell nTPM: 81.7
Samples: 4
Max nTPM: 91.3
Min nTPM: 64.5
RHH5306_R3672
91.3
RHH5214_R3585
91.3
RHH5242_R3614
79.6
RHH5271_R3643
64.5
Naive CD8 T-cell nTPM: 74.9
Samples: 4
Max nTPM: 103.2
Min nTPM: 43.7
RHH5201_R3572
43.7
RHH5229_R3601
61.8
RHH5258_R3630
103.2
RHH5287_R3659
90.7
Non-Vd2 gdTCR nTPM: 69.2
Samples: 4
Max nTPM: 112.9
Min nTPM: 43.9
RHH5235_R3607
43.9
RHH5264_R3636
65.8
RHH5207_R3578
54.2
RHH5299_R3665
112.9
T-reg nTPM: 87.8
Samples: 4
Max nTPM: 126.9
Min nTPM: 46.2
RHH5301_R3667
112.8
RHH5237_R3609
126.9
RHH5266_R3638
46.2
RHH5209_R3580
65.4
Terminal effector memory CD4 T-cell nTPM: 77.6
Samples: 2
Max nTPM: 95.3
Min nTPM: 59.9
RHH5243_R3615
59.9
RHH5272_R3644
95.3
Terminal effector memory CD8 T-cell nTPM: 87.2
Samples: 4
Max nTPM: 119.7
Min nTPM: 65.5
RHH5232_R3604
65.5
RHH5204_R3575
119.7
RHH5261_R3633
69.5
RHH5296_R3662
94.0
Vd2 gdTCR nTPM: 93.0
Samples: 4
Max nTPM: 108.7
Min nTPM: 64.5
RHH5234_R3606
91.6
RHH5206_R3577
107.2
RHH5263_R3635
64.5
RHH5298_R3664
108.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
