We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
92.4
nTPM
Monaco:
155.1
nTPM
Schmiedel:
69.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
92.4
HPA sample
nTPM
gdT-cell nTPM: 69.2
Samples: 6
Max nTPM: 101.3
Min nTPM: 46.9
P10809_1007
46.9
P10809_1022
101.3
P10809_1041
76.9
P10809_1060
66.1
P10809_1077
60.2
P10809_1098
63.6
MAIT T-cell nTPM: 92.4
Samples: 6
Max nTPM: 127.3
Min nTPM: 63.0
P10809_1006
63.0
P10809_1024
127.3
P10809_1043
95.0
P10809_1062
85.6
P10809_1083
82.5
P10809_1097
101.2
Memory CD4 T-cell nTPM: 68.2
Samples: 6
Max nTPM: 98.9
Min nTPM: 54.6
P10809_1014
58.5
P10809_1026
54.6
P10809_1045
98.9
P10809_1064
56.7
P10809_1086
65.4
P10809_1113
74.8
Memory CD8 T-cell nTPM: 84.3
Samples: 5
Max nTPM: 106.5
Min nTPM: 53.8
P10809_1012
53.8
P10809_1027
106.5
P10809_1046
85.0
P10809_1065
74.4
P10809_1111
101.7
Naive CD4 T-cell nTPM: 74.7
Samples: 6
Max nTPM: 108.2
Min nTPM: 59.8
P10809_1015
59.8
P10809_1030
76.9
P10809_1049
108.2
P10809_1068
64.7
P10809_1085
73.1
P10809_1112
65.4
Naive CD8 T-cell nTPM: 72.1
Samples: 6
Max nTPM: 86.7
Min nTPM: 61.9
P10809_1016
61.9
P10809_1031
86.7
P10809_1050
69.0
P10809_1069
69.4
P10809_1087
69.6
P10809_1110
76.1
T-reg nTPM: 71.0
Samples: 6
Max nTPM: 106.3
Min nTPM: 51.2
P10809_1018
66.1
P10809_1037
106.3
P10809_1056
51.2
P10809_1075
66.8
P10809_1094
51.6
P10809_1106
83.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
155.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 117.1
Samples: 4
Max nTPM: 126.1
Min nTPM: 106.4
RHH5202_R3573
106.4
RHH5230_R3602
115.0
RHH5259_R3631
126.1
RHH5288_R3660
120.9
Effector memory CD8 T-cell nTPM: 128.6
Samples: 4
Max nTPM: 146.4
Min nTPM: 104.1
RHH5203_R3574
146.4
RHH5231_R3603
104.1
RHH5260_R3632
127.4
RHH5289_R3661
136.6
MAIT T-cell nTPM: 142.1
Samples: 4
Max nTPM: 158.3
Min nTPM: 126.6
RHH5233_R3605
126.6
RHH5205_R3576
158.3
RHH5262_R3634
151.5
RHH5297_R3663
132.0
Memory CD4 T-cell TFH nTPM: 119.7
Samples: 4
Max nTPM: 138.0
Min nTPM: 98.2
RHH5300_R3666
98.2
RHH5236_R3608
118.1
RHH5265_R3637
138.0
RHH5208_R3579
124.6
Memory CD4 T-cell Th1 nTPM: 124.1
Samples: 4
Max nTPM: 154.4
Min nTPM: 90.4
RHH5210_R3581
154.4
RHH5302_R3668
126.3
RHH5238_R3610
90.4
RHH5267_R3639
125.4
Memory CD4 T-cell Th1/Th17 nTPM: 126.7
Samples: 4
Max nTPM: 154.7
Min nTPM: 98.3
RHH5303_R3669
98.3
RHH5211_R3582
154.7
RHH5239_R3611
133.0
RHH5268_R3640
120.9
Memory CD4 T-cell Th17 nTPM: 130.5
Samples: 4
Max nTPM: 140.9
Min nTPM: 118.2
RHH5304_R3670
118.2
RHH5212_R3583
122.1
RHH5240_R3612
140.6
RHH5269_R3641
140.9
Memory CD4 T-cell Th2 nTPM: 141.1
Samples: 4
Max nTPM: 173.3
Min nTPM: 111.6
RHH5305_R3671
111.6
RHH5213_R3584
135.4
RHH5241_R3613
173.3
RHH5270_R3642
143.9
Naive CD4 T-cell nTPM: 137.0
Samples: 4
Max nTPM: 155.4
Min nTPM: 116.0
RHH5306_R3672
116.0
RHH5214_R3585
121.7
RHH5242_R3614
155.0
RHH5271_R3643
155.4
Naive CD8 T-cell nTPM: 149.4
Samples: 4
Max nTPM: 190.6
Min nTPM: 95.3
RHH5201_R3572
190.6
RHH5229_R3601
95.3
RHH5258_R3630
164.9
RHH5287_R3659
146.7
Non-Vd2 gdTCR nTPM: 138.8
Samples: 4
Max nTPM: 182.8
Min nTPM: 110.7
RHH5235_R3607
182.8
RHH5264_R3636
123.5
RHH5207_R3578
138.0
RHH5299_R3665
110.7
T-reg nTPM: 103.9
Samples: 4
Max nTPM: 112.5
Min nTPM: 96.3
RHH5301_R3667
96.3
RHH5237_R3609
99.4
RHH5266_R3638
112.5
RHH5209_R3580
107.2
Terminal effector memory CD4 T-cell nTPM: 155.1
Samples: 2
Max nTPM: 167.3
Min nTPM: 142.9
RHH5243_R3615
167.3
RHH5272_R3644
142.9
Terminal effector memory CD8 T-cell nTPM: 130.1
Samples: 4
Max nTPM: 144.2
Min nTPM: 109.8
RHH5232_R3604
137.5
RHH5204_R3575
109.8
RHH5261_R3633
128.9
RHH5296_R3662
144.2
Vd2 gdTCR nTPM: 113.9
Samples: 4
Max nTPM: 139.5
Min nTPM: 95.5
RHH5234_R3606
139.5
RHH5206_R3577
95.5
RHH5263_R3635
111.2
RHH5298_R3664
109.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
