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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
266.5
nTPM
Monaco:
123.3
nTPM
Schmiedel:
61.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
266.5
HPA sample
nTPM
gdT-cell nTPM: 200.9
Samples: 6
Max nTPM: 247.0
Min nTPM: 111.1
P10809_1007
111.1
P10809_1022
247.0
P10809_1041
244.6
P10809_1060
208.5
P10809_1077
182.7
P10809_1098
211.2
MAIT T-cell nTPM: 180.3
Samples: 6
Max nTPM: 217.5
Min nTPM: 108.5
P10809_1006
108.5
P10809_1024
181.5
P10809_1043
216.1
P10809_1062
192.6
P10809_1083
165.6
P10809_1097
217.5
Memory CD4 T-cell nTPM: 181.3
Samples: 6
Max nTPM: 241.9
Min nTPM: 106.4
P10809_1014
106.4
P10809_1026
241.9
P10809_1045
192.8
P10809_1064
196.0
P10809_1086
170.2
P10809_1113
180.6
Memory CD8 T-cell nTPM: 192.9
Samples: 5
Max nTPM: 229.3
Min nTPM: 121.9
P10809_1012
121.9
P10809_1027
219.2
P10809_1046
229.3
P10809_1065
198.4
P10809_1111
195.9
Naive CD4 T-cell nTPM: 132.8
Samples: 6
Max nTPM: 165.0
Min nTPM: 60.6
P10809_1015
60.6
P10809_1030
136.2
P10809_1049
165.0
P10809_1068
131.6
P10809_1085
164.0
P10809_1112
139.5
Naive CD8 T-cell nTPM: 151.9
Samples: 6
Max nTPM: 197.0
Min nTPM: 63.9
P10809_1016
63.9
P10809_1031
170.7
P10809_1050
151.7
P10809_1069
197.0
P10809_1087
184.8
P10809_1110
143.1
T-reg nTPM: 266.5
Samples: 6
Max nTPM: 436.3
Min nTPM: 169.1
P10809_1018
169.1
P10809_1037
232.7
P10809_1056
436.3
P10809_1075
263.7
P10809_1094
275.5
P10809_1106
221.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
123.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 73.8
Samples: 4
Max nTPM: 91.7
Min nTPM: 56.1
RHH5202_R3573
79.7
RHH5230_R3602
67.8
RHH5259_R3631
56.1
RHH5288_R3660
91.7
Effector memory CD8 T-cell nTPM: 123.4
Samples: 4
Max nTPM: 150.2
Min nTPM: 90.3
RHH5203_R3574
150.2
RHH5231_R3603
125.0
RHH5260_R3632
90.3
RHH5289_R3661
128.0
MAIT T-cell nTPM: 86.6
Samples: 4
Max nTPM: 98.2
Min nTPM: 75.8
RHH5233_R3605
80.9
RHH5205_R3576
75.8
RHH5262_R3634
91.4
RHH5297_R3663
98.2
Memory CD4 T-cell TFH nTPM: 96.3
Samples: 4
Max nTPM: 108.4
Min nTPM: 89.2
RHH5300_R3666
94.2
RHH5236_R3608
108.4
RHH5265_R3637
89.2
RHH5208_R3579
93.2
Memory CD4 T-cell Th1 nTPM: 80.6
Samples: 4
Max nTPM: 97.4
Min nTPM: 61.6
RHH5210_R3581
97.4
RHH5302_R3668
95.8
RHH5238_R3610
61.6
RHH5267_R3639
67.4
Memory CD4 T-cell Th1/Th17 nTPM: 97.1
Samples: 4
Max nTPM: 149.8
Min nTPM: 31.7
RHH5303_R3669
125.9
RHH5211_R3582
149.8
RHH5239_R3611
31.7
RHH5268_R3640
80.9
Memory CD4 T-cell Th17 nTPM: 79.7
Samples: 4
Max nTPM: 104.5
Min nTPM: 60.8
RHH5304_R3670
90.6
RHH5212_R3583
104.5
RHH5240_R3612
60.8
RHH5269_R3641
62.8
Memory CD4 T-cell Th2 nTPM: 94.5
Samples: 4
Max nTPM: 105.3
Min nTPM: 82.9
RHH5305_R3671
100.6
RHH5213_R3584
105.3
RHH5241_R3613
89.1
RHH5270_R3642
82.9
Naive CD4 T-cell nTPM: 66.3
Samples: 4
Max nTPM: 77.9
Min nTPM: 53.4
RHH5306_R3672
70.9
RHH5214_R3585
77.9
RHH5242_R3614
63.0
RHH5271_R3643
53.4
Naive CD8 T-cell nTPM: 64.9
Samples: 4
Max nTPM: 85.2
Min nTPM: 27.8
RHH5201_R3572
77.9
RHH5229_R3601
27.8
RHH5258_R3630
85.2
RHH5287_R3659
68.6
Non-Vd2 gdTCR nTPM: 112.5
Samples: 4
Max nTPM: 140.4
Min nTPM: 71.0
RHH5235_R3607
71.0
RHH5264_R3636
140.4
RHH5207_R3578
108.0
RHH5299_R3665
130.7
T-reg nTPM: 99.9
Samples: 4
Max nTPM: 123.7
Min nTPM: 71.5
RHH5301_R3667
110.5
RHH5237_R3609
123.7
RHH5266_R3638
71.5
RHH5209_R3580
94.0
Terminal effector memory CD4 T-cell nTPM: 98.0
Samples: 2
Max nTPM: 123.4
Min nTPM: 72.6
RHH5243_R3615
72.6
RHH5272_R3644
123.4
Terminal effector memory CD8 T-cell nTPM: 111.4
Samples: 4
Max nTPM: 130.2
Min nTPM: 79.0
RHH5232_R3604
107.8
RHH5204_R3575
130.2
RHH5261_R3633
79.0
RHH5296_R3662
128.5
Vd2 gdTCR nTPM: 87.2
Samples: 4
Max nTPM: 132.5
Min nTPM: 64.4
RHH5234_R3606
74.2
RHH5206_R3577
132.5
RHH5263_R3635
64.4
RHH5298_R3664
77.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
