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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
51.0
nTPM
Monaco:
16.2
nTPM
Schmiedel:
17.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
51.0
HPA sample
nTPM
gdT-cell nTPM: 27.9
Samples: 6
Max nTPM: 77.5
Min nTPM: 5.2
P10809_1007
77.5
P10809_1022
8.7
P10809_1041
28.4
P10809_1060
5.2
P10809_1077
26.9
P10809_1098
20.7
MAIT T-cell nTPM: 19.0
Samples: 6
Max nTPM: 43.1
Min nTPM: 2.5
P10809_1006
30.9
P10809_1024
2.5
P10809_1043
21.3
P10809_1062
5.7
P10809_1083
10.3
P10809_1097
43.1
Memory CD4 T-cell nTPM: 44.5
Samples: 6
Max nTPM: 74.5
Min nTPM: 5.9
P10809_1014
67.0
P10809_1026
40.4
P10809_1045
74.5
P10809_1064
72.1
P10809_1086
6.9
P10809_1113
5.9
Memory CD8 T-cell nTPM: 51.0
Samples: 5
Max nTPM: 116.3
Min nTPM: 11.9
P10809_1012
58.4
P10809_1027
11.9
P10809_1046
116.3
P10809_1065
38.9
P10809_1111
29.4
Naive CD4 T-cell nTPM: 43.0
Samples: 6
Max nTPM: 131.9
Min nTPM: 11.7
P10809_1015
34.1
P10809_1030
24.4
P10809_1049
131.9
P10809_1068
29.9
P10809_1085
25.8
P10809_1112
11.7
Naive CD8 T-cell nTPM: 28.0
Samples: 6
Max nTPM: 56.2
Min nTPM: 4.8
P10809_1016
29.3
P10809_1031
15.0
P10809_1050
25.9
P10809_1069
56.2
P10809_1087
4.8
P10809_1110
37.0
T-reg nTPM: 46.4
Samples: 6
Max nTPM: 190.2
Min nTPM: 6.5
P10809_1018
10.7
P10809_1037
9.5
P10809_1056
190.2
P10809_1075
31.5
P10809_1094
6.5
P10809_1106
29.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
16.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 11.5
Samples: 4
Max nTPM: 21.3
Min nTPM: 0.5
RHH5202_R3573
0.5
RHH5230_R3602
16.5
RHH5259_R3631
21.3
RHH5288_R3660
7.5
Effector memory CD8 T-cell nTPM: 11.0
Samples: 4
Max nTPM: 22.6
Min nTPM: 1.0
RHH5203_R3574
2.6
RHH5231_R3603
17.9
RHH5260_R3632
22.6
RHH5289_R3661
1.0
MAIT T-cell nTPM: 7.5
Samples: 4
Max nTPM: 15.0
Min nTPM: 3.8
RHH5233_R3605
3.8
RHH5205_R3576
5.5
RHH5262_R3634
15.0
RHH5297_R3663
5.8
Memory CD4 T-cell TFH nTPM: 11.8
Samples: 4
Max nTPM: 34.6
Min nTPM: 0.9
RHH5300_R3666
6.0
RHH5236_R3608
34.6
RHH5265_R3637
5.8
RHH5208_R3579
0.9
Memory CD4 T-cell Th1 nTPM: 13.5
Samples: 4
Max nTPM: 24.2
Min nTPM: 1.5
RHH5210_R3581
1.5
RHH5302_R3668
15.2
RHH5238_R3610
24.2
RHH5267_R3639
13.1
Memory CD4 T-cell Th1/Th17 nTPM: 11.2
Samples: 4
Max nTPM: 20.2
Min nTPM: 6.0
RHH5303_R3669
6.0
RHH5211_R3582
6.9
RHH5239_R3611
11.6
RHH5268_R3640
20.2
Memory CD4 T-cell Th17 nTPM: 9.3
Samples: 4
Max nTPM: 13.2
Min nTPM: 4.2
RHH5304_R3670
4.2
RHH5212_R3583
13.2
RHH5240_R3612
6.8
RHH5269_R3641
12.8
Memory CD4 T-cell Th2 nTPM: 11.1
Samples: 4
Max nTPM: 15.6
Min nTPM: 4.2
RHH5305_R3671
10.5
RHH5213_R3584
14.2
RHH5241_R3613
4.2
RHH5270_R3642
15.6
Naive CD4 T-cell nTPM: 16.3
Samples: 4
Max nTPM: 32.9
Min nTPM: 4.0
RHH5306_R3672
15.8
RHH5214_R3585
32.9
RHH5242_R3614
4.0
RHH5271_R3643
12.3
Naive CD8 T-cell nTPM: 8.2
Samples: 4
Max nTPM: 13.1
Min nTPM: 0.5
RHH5201_R3572
0.5
RHH5229_R3601
13.1
RHH5258_R3630
9.2
RHH5287_R3659
10.0
Non-Vd2 gdTCR nTPM: 11.8
Samples: 4
Max nTPM: 15.1
Min nTPM: 8.6
RHH5235_R3607
15.1
RHH5264_R3636
9.5
RHH5207_R3578
8.6
RHH5299_R3665
14.1
T-reg nTPM: 12.4
Samples: 4
Max nTPM: 18.9
Min nTPM: 9.1
RHH5301_R3667
9.1
RHH5237_R3609
18.9
RHH5266_R3638
11.2
RHH5209_R3580
10.4
Terminal effector memory CD4 T-cell nTPM: 9.0
Samples: 2
Max nTPM: 15.7
Min nTPM: 2.2
RHH5243_R3615
15.7
RHH5272_R3644
2.2
Terminal effector memory CD8 T-cell nTPM: 12.4
Samples: 4
Max nTPM: 29.0
Min nTPM: 2.8
RHH5232_R3604
4.1
RHH5204_R3575
13.8
RHH5261_R3633
29.0
RHH5296_R3662
2.8
Vd2 gdTCR nTPM: 15.9
Samples: 4
Max nTPM: 22.5
Min nTPM: 5.6
RHH5234_R3606
5.6
RHH5206_R3577
22.5
RHH5263_R3635
13.9
RHH5298_R3664
21.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
