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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
227.6
nTPM
Monaco:
83.4
nTPM
Schmiedel:
99.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
227.6
HPA sample
nTPM
gdT-cell nTPM: 144.6
Samples: 6
Max nTPM: 157.6
Min nTPM: 134.9
P10809_1007
138.7
P10809_1022
143.6
P10809_1041
153.7
P10809_1060
157.6
P10809_1077
134.9
P10809_1098
139.3
MAIT T-cell nTPM: 146.2
Samples: 6
Max nTPM: 179.7
Min nTPM: 111.3
P10809_1006
111.3
P10809_1024
160.6
P10809_1043
149.4
P10809_1062
152.2
P10809_1083
124.0
P10809_1097
179.7
Memory CD4 T-cell nTPM: 154.9
Samples: 6
Max nTPM: 186.9
Min nTPM: 137.6
P10809_1014
137.6
P10809_1026
186.9
P10809_1045
154.5
P10809_1064
165.0
P10809_1086
138.9
P10809_1113
146.4
Memory CD8 T-cell nTPM: 155.6
Samples: 5
Max nTPM: 189.9
Min nTPM: 125.5
P10809_1012
125.5
P10809_1027
189.9
P10809_1046
155.6
P10809_1065
159.6
P10809_1111
147.4
Naive CD4 T-cell nTPM: 144.7
Samples: 6
Max nTPM: 214.0
Min nTPM: 110.9
P10809_1015
125.6
P10809_1030
157.4
P10809_1049
214.0
P10809_1068
128.3
P10809_1085
110.9
P10809_1112
131.9
Naive CD8 T-cell nTPM: 139.8
Samples: 6
Max nTPM: 155.2
Min nTPM: 123.5
P10809_1016
132.8
P10809_1031
149.3
P10809_1050
146.4
P10809_1069
155.2
P10809_1087
131.7
P10809_1110
123.5
T-reg nTPM: 227.6
Samples: 6
Max nTPM: 280.2
Min nTPM: 173.3
P10809_1018
173.3
P10809_1037
235.8
P10809_1056
280.2
P10809_1075
256.6
P10809_1094
211.4
P10809_1106
208.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
83.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 61.3
Samples: 4
Max nTPM: 70.3
Min nTPM: 55.5
RHH5202_R3573
59.1
RHH5230_R3602
60.2
RHH5259_R3631
70.3
RHH5288_R3660
55.5
Effector memory CD8 T-cell nTPM: 68.2
Samples: 4
Max nTPM: 81.5
Min nTPM: 59.5
RHH5203_R3574
59.5
RHH5231_R3603
63.4
RHH5260_R3632
81.5
RHH5289_R3661
68.2
MAIT T-cell nTPM: 56.9
Samples: 4
Max nTPM: 70.7
Min nTPM: 43.6
RHH5233_R3605
43.6
RHH5205_R3576
70.7
RHH5262_R3634
58.7
RHH5297_R3663
54.6
Memory CD4 T-cell TFH nTPM: 58.9
Samples: 4
Max nTPM: 74.9
Min nTPM: 52.6
RHH5300_R3666
54.9
RHH5236_R3608
74.9
RHH5265_R3637
53.1
RHH5208_R3579
52.6
Memory CD4 T-cell Th1 nTPM: 63.7
Samples: 4
Max nTPM: 77.8
Min nTPM: 43.9
RHH5210_R3581
43.9
RHH5302_R3668
68.5
RHH5238_R3610
77.8
RHH5267_R3639
64.6
Memory CD4 T-cell Th1/Th17 nTPM: 65.2
Samples: 4
Max nTPM: 74.4
Min nTPM: 58.2
RHH5303_R3669
74.4
RHH5211_R3582
58.2
RHH5239_R3611
60.6
RHH5268_R3640
67.7
Memory CD4 T-cell Th17 nTPM: 59.3
Samples: 4
Max nTPM: 76.9
Min nTPM: 52.1
RHH5304_R3670
76.9
RHH5212_R3583
52.1
RHH5240_R3612
52.2
RHH5269_R3641
55.9
Memory CD4 T-cell Th2 nTPM: 58.8
Samples: 4
Max nTPM: 80.7
Min nTPM: 49.1
RHH5305_R3671
80.7
RHH5213_R3584
50.2
RHH5241_R3613
49.1
RHH5270_R3642
55.2
Naive CD4 T-cell nTPM: 76.0
Samples: 4
Max nTPM: 91.4
Min nTPM: 64.4
RHH5306_R3672
91.4
RHH5214_R3585
73.3
RHH5242_R3614
64.4
RHH5271_R3643
74.8
Naive CD8 T-cell nTPM: 83.4
Samples: 4
Max nTPM: 93.6
Min nTPM: 70.1
RHH5201_R3572
85.0
RHH5229_R3601
85.0
RHH5258_R3630
70.1
RHH5287_R3659
93.6
Non-Vd2 gdTCR nTPM: 70.5
Samples: 4
Max nTPM: 77.8
Min nTPM: 59.4
RHH5235_R3607
76.2
RHH5264_R3636
68.4
RHH5207_R3578
59.4
RHH5299_R3665
77.8
T-reg nTPM: 58.1
Samples: 4
Max nTPM: 69.1
Min nTPM: 50.5
RHH5301_R3667
55.4
RHH5237_R3609
50.5
RHH5266_R3638
69.1
RHH5209_R3580
57.4
Terminal effector memory CD4 T-cell nTPM: 60.2
Samples: 2
Max nTPM: 68.0
Min nTPM: 52.4
RHH5243_R3615
52.4
RHH5272_R3644
68.0
Terminal effector memory CD8 T-cell nTPM: 65.8
Samples: 4
Max nTPM: 81.5
Min nTPM: 47.5
RHH5232_R3604
47.5
RHH5204_R3575
73.0
RHH5261_R3633
81.5
RHH5296_R3662
61.2
Vd2 gdTCR nTPM: 76.7
Samples: 4
Max nTPM: 113.9
Min nTPM: 38.3
RHH5234_R3606
38.3
RHH5206_R3577
113.9
RHH5263_R3635
85.8
RHH5298_R3664
68.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
