HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:13.9 nTPM
HPA Brain:13.0 nTPM
GTEx:13.9 nTPM
FANTOM5:19.9 Scaled Tags Per Million
Pig:0.7 nTPM
Mouse:0.7 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031096
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.0
Sample id Sample description nTPM
Hippocampus
nTPM: 13.0
1898 Male, age 80, left hemisphere 15.8
1855 Male, age 76, left hemisphere 15.0
2621 Female, age 67, right hemisphere 13.1
1911 Female, age 85, right hemisphere 12.7
2148 Female, age 91, left hemisphere 11.3
2529 Female, age 94, left hemisphere 9.8
Dentate gyrus
nTPM: 13.0
2530 Female, age 94, left hemisphere 19.6
2010 Male, age 76, both hemispheres 15.7
1927 Female, age 91, both hemispheres 11.6
2531 Female, age 67, both hemispheres 11.6
2246 Female, age 85, both hemispheres 9.7
2528 Male, age 74, both hemispheres 9.6
Entorhinal gyrus
nTPM: 9.9
2117 Female, age 91, right hemisphere 13.7
1787 Male, age 76, left hemisphere 11.6
2764 Male, age 80, right hemisphere 11.2
1938 Female, age 85, left hemisphere 8.5
2613 Female, age 94, left hemisphere 7.4
2686 Male, age 75, right hemisphere 6.9
Hippocampus, CA1
nTPM: 12.2
2749 Male, age 80, left hemisphere 17.8
2082 Female, age 91, right hemisphere 11.8
1873 Female, age 85, both hemispheres 11.7
2045 Male, age 76, both hemispheres 10.6
2527 Male, age 74, both hemispheres 8.9
Hippocampus, CA2
nTPM: 11.9
1963 Male, age 80, left hemisphere 14.1
1940 Female, age 85, left hemisphere 13.7
1892 Male, age 76, both hemispheres 12.6
2113 Female, age 91, right hemisphere 10.7
2437 Female, age 94, left hemisphere 10.7
2249 Male, age 74, both hemispheres 9.8
Hippocampus, CA3
nTPM: 11.0
1867 Male, age 76, both hemispheres 13.9
1891 Female, age 85, both hemispheres 13.2
2137 Male, age 80, left hemisphere 13.0
2861 Female, age 67, both hemispheres 9.8
2436 Male, age 74, both hemispheres 8.7
2620 Female, age 94, left hemisphere 7.4
Parahippocampal cortex
nTPM: 8.6
2018 Male, age 76, both hemispheres 17.0
1990 Female, age 91, right hemisphere 9.7
2245 Female, age 91, both hemispheres 8.8
1850 Male, age 80, both hemispheres 8.4
1933 Female, age 85, both hemispheres 7.7
2693 Female, age 94, both hemispheres 7.6
2250 Female, age 67, right hemisphere 7.5
2692 Male, age 74, both hemispheres 7.4
2532 Female, age 72, left hemisphere 6.6
2622 Female, age 67, right hemisphere 5.0
Perirhinal gyrus
nTPM: 7.1
1794 Male, age 80, right hemisphere 8.6
2848 Male, age 76, right hemisphere 7.7
2521 Female, age 94, right hemisphere 7.0
1847 Female, age 91, left hemisphere 6.7
1841 Female, age 85, right hemisphere 5.5
Subiculum
nTPM: 12.8
2042 Male, age 76, both hemispheres 17.6
1901 Male, age 80, both hemispheres 14.7
2729 Female, age 91, right hemisphere 12.8
1977 Female, age 85, both hemispheres 12.1
2438 Female, age 94, left hemisphere 11.0
2619 Male, age 74, both hemispheres 8.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.9
Samples: 197

Max nTPM: 56.7
Min nTPM: 2.0
Std nTPM: 6.3
Median nTPM: 13.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 56.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 37.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 36.4
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 32.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 30.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 26.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 25.5
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 24.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 23.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 23.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 23.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.9
FF:10169-103B7 60 years, female 24.9
FF:10153-102I9 76 years, female 14.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.7
Pig sample Sample description nTPM
Subiculum
nTPM: 0.6
Samples: 4

Max nTPM: 0.7
Min nTPM: 0.4
Sample A Female 0.6
Sample B Female 0.7
Sample C Male 0.7
Sample D Male 0.4
Dorsal hippocampus
nTPM: 0.5
Samples: 4

Max nTPM: 0.7
Min nTPM: 0.4
Sample A Female 0.4
Sample B Female 0.4
Sample C Male 0.7
Sample D Male 0.5
Entorhinal cortex
nTPM: 0.7
Samples: 4

Max nTPM: 0.8
Min nTPM: 0.6
Sample A Female 0.7
Sample B Female 0.8
Sample C Male 0.6
Sample D Male 0.8
Ventral hippocampus
nTPM: 0.5
Samples: 4

Max nTPM: 0.7
Min nTPM: 0.4
Sample A Female 0.4
Sample B Female 0.5
Sample C Male 0.7
Sample D Male 0.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.7
Samples: 4

Max nTPM: 0.9
Min nTPM: 0.4
Sample A Male 0.6
Sample B Male 0.4
Sample C Female 0.9
Sample D Female 0.9
Hippocampal formation
nTPM: 0.5
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.4
Sample A Male 0.4
Sample B Male 0.5
Sample C Female 0.6
Sample D Female 0.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
69528130 Antisense, RP_050421_03_B09, Mouse strain C57BL/6J (56 days, male) 0.2

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