HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:18.0 nTPM
HPA Brain:12.3 nTPM
GTEx:18.0 nTPM
FANTOM5:26.7 Scaled Tags Per Million
Pig:12.7 nTPM
Mouse:12.7 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042075
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.3
Sample id Sample description nTPM
Hippocampus
nTPM: 12.0
2529 Female, age 94, left hemisphere 13.6
2148 Female, age 91, left hemisphere 12.7
1911 Female, age 85, right hemisphere 11.8
2621 Female, age 67, right hemisphere 11.7
1898 Male, age 80, left hemisphere 11.2
1855 Male, age 76, left hemisphere 11.1
Dentate gyrus
nTPM: 11.2
2531 Female, age 67, both hemispheres 12.3
2246 Female, age 85, both hemispheres 12.0
2010 Male, age 76, both hemispheres 11.9
2528 Male, age 74, both hemispheres 10.9
2530 Female, age 94, left hemisphere 10.5
1927 Female, age 91, both hemispheres 9.5
Entorhinal gyrus
nTPM: 11.3
2764 Male, age 80, right hemisphere 11.9
1938 Female, age 85, left hemisphere 11.8
1787 Male, age 76, left hemisphere 11.5
2117 Female, age 91, right hemisphere 11.5
2686 Male, age 75, right hemisphere 10.5
2613 Female, age 94, left hemisphere 10.3
Hippocampus, CA1
nTPM: 11.8
2045 Male, age 76, both hemispheres 13.1
2749 Male, age 80, left hemisphere 12.9
2527 Male, age 74, both hemispheres 12.6
1873 Female, age 85, both hemispheres 10.3
2082 Female, age 91, right hemisphere 9.9
Hippocampus, CA2
nTPM: 11.1
1892 Male, age 76, both hemispheres 12.0
1940 Female, age 85, left hemisphere 11.8
1963 Male, age 80, left hemisphere 11.6
2437 Female, age 94, left hemisphere 11.3
2249 Male, age 74, both hemispheres 10.5
2113 Female, age 91, right hemisphere 9.5
Hippocampus, CA3
nTPM: 12.2
2861 Female, age 67, both hemispheres 12.7
2620 Female, age 94, left hemisphere 12.5
2137 Male, age 80, left hemisphere 12.4
1891 Female, age 85, both hemispheres 12.1
2436 Male, age 74, both hemispheres 12.0
1867 Male, age 76, both hemispheres 11.7
Parahippocampal cortex
nTPM: 11.6
2532 Female, age 72, left hemisphere 13.7
1850 Male, age 80, both hemispheres 13.2
2245 Female, age 91, both hemispheres 12.1
1990 Female, age 91, right hemisphere 11.8
2622 Female, age 67, right hemisphere 11.4
2018 Male, age 76, both hemispheres 11.3
2693 Female, age 94, both hemispheres 11.3
2692 Male, age 74, both hemispheres 10.6
2250 Female, age 67, right hemisphere 10.3
1933 Female, age 85, both hemispheres 10.0
Perirhinal gyrus
nTPM: 12.3
1794 Male, age 80, right hemisphere 13.2
1847 Female, age 91, left hemisphere 13.0
2848 Male, age 76, right hemisphere 12.2
1841 Female, age 85, right hemisphere 12.0
2521 Female, age 94, right hemisphere 11.2
Subiculum
nTPM: 11.8
1901 Male, age 80, both hemispheres 13.1
1977 Female, age 85, both hemispheres 12.5
2042 Male, age 76, both hemispheres 12.1
2438 Female, age 94, left hemisphere 11.6
2619 Male, age 74, both hemispheres 10.7
2729 Female, age 91, right hemisphere 10.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.0
Samples: 197

Max nTPM: 34.2
Min nTPM: 6.3
Std nTPM: 5.5
Median nTPM: 17.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 34.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 33.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 32.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 31.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 31.0
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 30.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 30.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 30.7
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 29.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 29.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 28.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.7
FF:10153-102I9 76 years, female 28.5
FF:10169-103B7 60 years, female 24.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.7
Pig sample Sample description nTPM
Subiculum
nTPM: 11.4
Samples: 4

Max nTPM: 13.3
Min nTPM: 10.2
Sample A Female 13.3
Sample B Female 11.7
Sample C Male 10.3
Sample D Male 10.2
Dorsal hippocampus
nTPM: 12.7
Samples: 4

Max nTPM: 14.0
Min nTPM: 11.2
Sample A Female 13.9
Sample B Female 14.0
Sample C Male 11.8
Sample D Male 11.2
Entorhinal cortex
nTPM: 11.2
Samples: 4

Max nTPM: 12.2
Min nTPM: 9.7
Sample A Female 12.0
Sample B Female 12.2
Sample C Male 11.0
Sample D Male 9.7
Ventral hippocampus
nTPM: 11.6
Samples: 4

Max nTPM: 13.2
Min nTPM: 10.7
Sample A Female 13.2
Sample B Female 11.5
Sample C Male 11.1
Sample D Male 10.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.6
Samples: 4

Max nTPM: 13.6
Min nTPM: 12.1
Sample A Male 12.1
Sample B Male 13.6
Sample C Female 12.6
Sample D Female 12.1
Hippocampal formation
nTPM: 12.8
Samples: 4

Max nTPM: 14.9
Min nTPM: 11.6
Sample A Male 14.9
Sample B Male 12.3
Sample C Female 11.6
Sample D Female 12.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
70539089 Antisense, RP_050321_02_C07, Mouse strain C57BL/6J (56 days, male) 1.2

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