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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
73.7
nTPM
HPA:
73.7
nTPM
GTEx:
62.8
nTPM
FANTOM5:
351.8
Scaled Tags Per Million
SMALL INTESTINE - Annotated protein expression
Pending normal tissue analysis
SMALL INTESTINE - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPM
73.7
Male, age 65
Small intestine sample 232 nTPM: 37.3
Cell types%
Glandular cells:
55
Smooth muscle cells:
5
Other cell types:
40
Male, age 39
Small intestine sample 233 nTPM: 174.3
Cell types%
Glandular cells:
40
Smooth muscle cells:
5
Other cell types:
55
Male, age 68
Small intestine sample 234 nTPM: 27.1
Cell types%
Glandular cells:
30
Smooth muscle cells:
15
Other cell types:
55
Male, age 85
Small intestine sample 235 nTPM: 56.1
SMALL INTESTINE - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
62.8
GTEx sample id
Sample description
nTPM
Small Intestine - Terminal Ileum Average nTPM: 62.8
Samples: 187
Max nTPM: 533.2
Min nTPM: 2.6
Std nTPM: 66.6
Median nTPM: 48.5
GTEX-111YS-1426-SM-5GID8
60-69 years, male
533.2
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
341.2
GTEX-1J8Q3-2526-SM-CNNQ4
60-69 years, male
251.5
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
232.3
GTEX-1GMR2-1026-SM-7MKHJ
50-59 years, male
231.6
GTEX-1122O-1326-SM-5H11F
60-69 years, female
231.1
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
225.5
GTEX-14PN3-2026-SM-68729
60-69 years, female
198.5
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
198.3
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
190.6
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
172.8
GTEX-1QP2A-2426-SM-EXOJA
50-59 years, male
171.5
GTEX-ZDTT-1726-SM-5HL69
60-69 years, male
163.8
GTEX-ZTSS-0926-SM-59865
40-49 years, male
160.0
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
157.6
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
154.1
GTEX-1AMFI-1926-SM-731F2
50-59 years, female
152.3
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
152.3
GTEX-1B8KE-1726-SM-7IGMN
50-59 years, male
137.5
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
133.4
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
130.4
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
129.0
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
127.4
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
117.7
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
116.2
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
116.2
GTEX-14XAO-1926-SM-6ETZO
60-69 years, female
114.5
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
112.5
GTEX-131XE-0926-SM-5HL7J
50-59 years, male
111.9
GTEX-15G1A-1726-SM-6LPI4
30-39 years, male
110.7
GTEX-YFCO-1326-SM-664NV
40-49 years, male
110.1
GTEX-14PJ6-1726-SM-6AJBN
60-69 years, female
107.2
GTEX-WY7C-1826-SM-4ONCE
50-59 years, male
105.7
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
103.3
GTEX-144GM-1026-SM-79OKU
20-29 years, male
99.6
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
97.6
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
97.6
GTEX-Y3I4-1326-SM-4TT8Z
50-59 years, male
97.0
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
92.9
GTEX-ZLWG-1626-SM-DNZZ1
50-59 years, female
92.3
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
91.9
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
86.0
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
84.9
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
84.1
GTEX-11LCK-1926-SM-5A5KE
30-39 years, male
84.0
GTEX-14PKU-1626-SM-6871C
40-49 years, female
83.8
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
83.8
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
82.4
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
82.1
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
77.7
GTEX-ZF29-1626-SM-4WKFJ
60-69 years, female
77.1
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
77.0
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
75.1
GTEX-1JN76-1126-SM-C1YRL
20-29 years, female
74.5
GTEX-ZG7Y-1926-SM-DNZZ5
50-59 years, male
73.7
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
73.6
GTEX-WHSB-1026-SM-4M1XN
50-59 years, male
73.1
GTEX-13W3W-2026-SM-5K7UL
60-69 years, female
72.1
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
71.7
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
70.7
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
68.3
GTEX-1C475-1426-SM-793CH
40-49 years, female
67.5
GTEX-ZAB5-1526-SM-5HL9P
50-59 years, male
67.1
GTEX-1I1GT-1826-SM-ARZLW
60-69 years, female
66.1
GTEX-WFON-1526-SM-4LVMP
40-49 years, male
65.6
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
65.4
GTEX-1R9JW-1926-SM-EVR4J
30-39 years, female
64.3
GTEX-1S82Z-1826-SM-E9TIK
30-39 years, female
63.3
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
62.7
GTEX-XPVG-1726-SM-4B65W
50-59 years, male
62.7
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
62.7
GTEX-117YX-0326-SM-5GICL
50-59 years, male
61.6
GTEX-1R7EU-1326-SM-E6CQ6
60-69 years, male
61.1
GTEX-14PK6-1626-SM-6871I
70-79 years, female
60.3
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
60.2
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
58.2
GTEX-Y5V5-1826-SM-4VDS5
60-69 years, female
57.5
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
56.4
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
56.0
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
55.2
GTEX-WYJK-1526-SM-4ONCW
50-59 years, male
55.1
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
54.1
GTEX-1OKEX-1126-SM-DTXEB
60-69 years, male
52.3
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
51.8
GTEX-1LH75-1926-SM-DIPGD
50-59 years, female
51.8
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
51.4
GTEX-17KNJ-1626-SM-718AL
50-59 years, male
51.3
GTEX-14PJN-0826-SM-686ZL
30-39 years, male
51.1
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
50.9
GTEX-1QCLZ-2126-SM-EWRNC
60-69 years, female
50.6
GTEX-13113-1226-SM-5EGHT
60-69 years, female
50.5
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
49.2
GTEX-13NYB-1826-SM-5J1N3
40-49 years, male
48.8
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
48.5
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
48.3
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
47.7
GTEX-13X6H-1826-SM-7EWCZ
50-59 years, female
47.5
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
46.8
GTEX-16MTA-1526-SM-6LPJB
50-59 years, male
45.1
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
42.6
GTEX-1QW4Y-1226-SM-EWRMY
30-39 years, male
42.6
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
41.7
GTEX-1CAMR-0826-SM-7MKFK
20-29 years, male
40.6
GTEX-13111-1426-SM-5DUW3
50-59 years, male
40.2
GTEX-14PKV-2026-SM-6AJ9A
20-29 years, female
38.5
GTEX-14C39-1826-SM-5ZZW4
40-49 years, male
38.2
GTEX-Y111-2226-SM-4SOJB
50-59 years, male
37.7
GTEX-1J8QM-1026-SM-C1YQA
60-69 years, female
36.1
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
33.1
GTEX-1KXAM-2026-SM-DHXKI
60-69 years, male
33.0
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
32.9
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
32.8
GTEX-16AAH-1426-SM-7KFTR
50-59 years, male
32.7
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
31.4
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
30.4
GTEX-1QPFJ-2626-SM-DPRZU
30-39 years, female
30.4
GTEX-13O61-1326-SM-5KM31
60-69 years, male
28.2
GTEX-14PJ3-1326-SM-664O7
50-59 years, male
28.0
GTEX-1192X-2526-SM-59868
50-59 years, male
27.3
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
27.2
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
27.1
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
27.0
GTEX-1R9PM-1626-SM-DPRY9
20-29 years, male
26.5
GTEX-17HHE-1726-SM-79OKT
50-59 years, male
26.1
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
25.9
GTEX-1S5ZA-1326-SM-EV7BB
20-29 years, male
25.9
GTEX-1L5NE-1826-SM-EV79T
50-59 years, male
24.8
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
24.3
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
23.9
GTEX-1BAJH-2526-SM-7IGOT
70-79 years, male
23.8
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
23.8
GTEX-1C64O-2526-SM-79ONO
60-69 years, male
23.4
GTEX-1CAMS-2426-SM-7DHMV
40-49 years, female
21.9
GTEX-1JK1U-1226-SM-CNNPN
60-69 years, male
21.2
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
20.6
GTEX-14BMU-1426-SM-5TDE5
20-29 years, female
17.7
GTEX-15EU6-1826-SM-7PC1W
50-59 years, male
17.5
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
17.1
GTEX-1HSMQ-2226-SM-C1YRD
50-59 years, male
17.1
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
15.1
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
15.0
GTEX-17MFQ-1026-SM-7KFSZ
20-29 years, male
14.3
GTEX-1497J-1926-SM-5TDCC
60-69 years, male
13.9
GTEX-1B8KZ-1126-SM-7IGLX
50-59 years, male
13.5
GTEX-1GMR3-2726-SM-7MKFB
40-49 years, male
13.3
GTEX-1RAZA-1826-SM-DTXA2
20-29 years, male
13.3
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
12.8
GTEX-16NGA-1126-SM-7KFSY
40-49 years, female
12.8
GTEX-1JMQK-2426-SM-CXZJU
60-69 years, male
12.5
GTEX-1PDJ9-1826-SM-E9U66
20-29 years, male
12.5
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
12.2
GTEX-1LGOU-1426-SM-D3L8N
20-29 years, female
12.1
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
11.9
GTEX-1K9T9-2726-SM-D4P3E
50-59 years, female
11.5
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
11.4
GTEX-18A66-2526-SM-7KFTZ
60-69 years, male
11.4
GTEX-1MUQO-2426-SM-EAZ5A
60-69 years, male
11.2
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
10.9
GTEX-1RAZR-1826-SM-E6CRE
40-49 years, male
10.8
GTEX-1R7EV-1226-SM-DTX82
40-49 years, male
10.6
GTEX-15DZA-0826-SM-6AJBF
30-39 years, female
9.4
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
9.3
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
9.1
GTEX-1MGNQ-2326-SM-EV7BG
40-49 years, male
8.5
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
8.4
GTEX-1EMGI-2826-SM-7IGMR
60-69 years, male
8.1
GTEX-1R9K5-2026-SM-E6CPS
50-59 years, male
8.0
GTEX-1H1DE-1426-SM-9JGHV
20-29 years, male
7.7
GTEX-1R9K4-2326-SM-E6CRB
60-69 years, male
6.8
GTEX-1OJC3-1626-SM-E9U65
20-29 years, male
6.7
GTEX-1F75I-2526-SM-9WPOZ
40-49 years, male
6.6
GTEX-11TUW-1926-SM-5BC58
60-69 years, male
6.1
GTEX-18QFQ-1626-SM-72D7H
30-39 years, male
6.1
GTEX-1IKOE-1926-SM-ARU7V
30-39 years, female
6.1
GTEX-1QP28-1726-SM-E6CRK
50-59 years, female
6.1
GTEX-1NSGN-2126-SM-DPRYN
50-59 years, male
5.7
GTEX-1GL5R-2026-SM-7MKHP
50-59 years, male
5.6
GTEX-1CB4F-1826-SM-7MGXI
60-69 years, male
5.5
GTEX-1JJE9-2226-SM-CXZJM
70-79 years, male
5.2
GTEX-16A39-1426-SM-6LLI6
30-39 years, female
5.0
GTEX-1RAZQ-2226-SM-DPRZR
30-39 years, male
4.7
GTEX-1LBAC-1526-SM-CXZKU
20-29 years, male
4.1
GTEX-1AX8Z-2526-SM-731E3
60-69 years, male
3.8
GTEX-183FY-1626-SM-793D8
20-29 years, male
3.4
GTEX-1H11D-2526-SM-9JGGU
40-49 years, male
3.1
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
2.7
GTEX-1PIEJ-1526-SM-E6CP8
20-29 years, female
2.6
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SMALL INTESTINE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
