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SLC35D2
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  • SLC35D2
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SLC35D2
Synonyms SQV7L, UGTrel8
Gene descriptioni

Full gene name according to HGNC.

Solute carrier family 35 member D2
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Metabolic proteins
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 9
Cytoband q22.32
Chromosome location (bp) 96313444 - 96383711
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000130958 (version 109)
Entrez gene 11046
HGNC HGNC:20799
UniProt Q76EJ3 (UniProt - Evidence at protein level)
neXtProt NX_Q76EJ3
GeneCards SLC35D2
Antibodypedia SLC35D2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Sugar transport, Transport
Gene summary (Entrez)i

Useful information about the gene from Entrez

Nucleotide sugars, which are synthesized in the cytosol or the nucleus, are high-energy donor substrates for glycosyltransferases located in the lumen of the endoplasmic reticulum and Golgi apparatus. Translocation of nucleotide sugars from the cytosol into the lumen compartment is mediated by specific nucleotide sugar transporters, such as SLC35D2 (Suda et al., 2004).[supplied by OMIM, Mar 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SLC35D2-201
ENSP00000253270
ENST00000253270
Q76EJ3
[Direct mapping] UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter
Show all
A0A024R9N5
[Target identity:100%; Query identity:100%] Solute carrier family 35, member D2, isoform CRA_a
Show all
Metabolic proteins
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000139 [Golgi membrane]
GO:0005338 [nucleotide-sugar transmembrane transporter activity]
GO:0005461 [UDP-glucuronic acid transmembrane transporter activity]
GO:0005462 [UDP-N-acetylglucosamine transmembrane transporter activity]
GO:0005463 [UDP-N-acetylgalactosamine transmembrane transporter activity]
GO:0005794 [Golgi apparatus]
GO:0008150 [biological_process]
GO:0008643 [carbohydrate transport]
GO:0015012 [heparan sulfate proteoglycan biosynthetic process]
GO:0015297 [antiporter activity]
GO:0015787 [UDP-glucuronic acid transmembrane transport]
GO:0015789 [UDP-N-acetylgalactosamine transmembrane transport]
GO:0015931 [nucleobase-containing compound transport]
GO:0016020 [membrane]
GO:0018146 [keratan sulfate biosynthetic process]
GO:0055085 [transmembrane transport]
GO:1901264 [carbohydrate derivative transport]
GO:1990569 [UDP-N-acetylglucosamine transmembrane transport]
Show all
337 aa
36.7 kDa
No >9
SLC35D2-202
ENSP00000364406
ENST00000375257
Q5VZJ2
[Direct mapping] UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   5TM proteins predicted by MDM
Show all
GO:0016020 [membrane]
Show all
163 aa
17.4 kDa
No 5
SLC35D2-203
ENSP00000364408
ENST00000375259
Q76EJ3
[Direct mapping] UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter
Show all
Metabolic proteins
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   8TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000139 [Golgi membrane]
GO:0005338 [nucleotide-sugar transmembrane transporter activity]
GO:0005461 [UDP-glucuronic acid transmembrane transporter activity]
GO:0005462 [UDP-N-acetylglucosamine transmembrane transporter activity]
GO:0005463 [UDP-N-acetylgalactosamine transmembrane transporter activity]
GO:0005794 [Golgi apparatus]
GO:0008150 [biological_process]
GO:0008643 [carbohydrate transport]
GO:0015012 [heparan sulfate proteoglycan biosynthetic process]
GO:0015297 [antiporter activity]
GO:0015787 [UDP-glucuronic acid transmembrane transport]
GO:0015789 [UDP-N-acetylgalactosamine transmembrane transport]
GO:0015931 [nucleobase-containing compound transport]
GO:0016020 [membrane]
GO:0018146 [keratan sulfate biosynthetic process]
GO:0055085 [transmembrane transport]
GO:1901264 [carbohydrate derivative transport]
GO:1990569 [UDP-N-acetylglucosamine transmembrane transport]
Show all
249 aa
26.7 kDa
No 8
SLC35D2-205
ENSP00000498151
ENST00000490599
A0A3B3IU97
[Direct mapping] UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   6TM proteins predicted by MDM
Show all
GO:0016020 [membrane]
Show all
193 aa
21.3 kDa
No 6

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