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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
115.1
nTPM
Monaco:
110.6
nTPM
Schmiedel:
279.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
115.1
HPA sample
nTPM
gdT-cell nTPM: 105.0
Samples: 6
Max nTPM: 119.0
Min nTPM: 76.9
P10809_1007
76.9
P10809_1022
116.9
P10809_1041
111.6
P10809_1060
103.4
P10809_1077
119.0
P10809_1098
102.0
MAIT T-cell nTPM: 103.9
Samples: 6
Max nTPM: 120.3
Min nTPM: 69.2
P10809_1006
69.2
P10809_1024
120.3
P10809_1043
89.0
P10809_1062
109.5
P10809_1083
120.2
P10809_1097
115.1
Memory CD4 T-cell nTPM: 91.8
Samples: 6
Max nTPM: 110.2
Min nTPM: 66.7
P10809_1014
66.7
P10809_1026
105.2
P10809_1045
87.0
P10809_1064
110.2
P10809_1086
90.2
P10809_1113
91.6
Memory CD8 T-cell nTPM: 97.6
Samples: 5
Max nTPM: 128.0
Min nTPM: 69.5
P10809_1012
69.5
P10809_1027
118.2
P10809_1046
86.2
P10809_1065
128.0
P10809_1111
86.2
Naive CD4 T-cell nTPM: 86.0
Samples: 6
Max nTPM: 107.4
Min nTPM: 51.3
P10809_1015
51.3
P10809_1030
93.2
P10809_1049
90.4
P10809_1068
107.4
P10809_1085
95.3
P10809_1112
78.3
Naive CD8 T-cell nTPM: 82.4
Samples: 6
Max nTPM: 99.5
Min nTPM: 53.2
P10809_1016
53.2
P10809_1031
94.4
P10809_1050
73.3
P10809_1069
99.5
P10809_1087
92.0
P10809_1110
81.8
T-reg nTPM: 115.1
Samples: 6
Max nTPM: 152.6
Min nTPM: 86.5
P10809_1018
86.5
P10809_1037
126.9
P10809_1056
152.6
P10809_1075
118.5
P10809_1094
106.9
P10809_1106
98.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
110.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 68.4
Samples: 4
Max nTPM: 76.8
Min nTPM: 50.7
RHH5202_R3573
72.2
RHH5230_R3602
50.7
RHH5259_R3631
76.8
RHH5288_R3660
74.0
Effector memory CD8 T-cell nTPM: 84.3
Samples: 4
Max nTPM: 91.5
Min nTPM: 78.8
RHH5203_R3574
83.9
RHH5231_R3603
78.8
RHH5260_R3632
82.9
RHH5289_R3661
91.5
MAIT T-cell nTPM: 71.1
Samples: 4
Max nTPM: 80.9
Min nTPM: 52.0
RHH5233_R3605
72.0
RHH5205_R3576
52.0
RHH5262_R3634
80.9
RHH5297_R3663
79.6
Memory CD4 T-cell TFH nTPM: 68.7
Samples: 4
Max nTPM: 93.6
Min nTPM: 46.0
RHH5300_R3666
46.0
RHH5236_R3608
65.0
RHH5265_R3637
93.6
RHH5208_R3579
70.1
Memory CD4 T-cell Th1 nTPM: 67.4
Samples: 4
Max nTPM: 79.1
Min nTPM: 60.7
RHH5210_R3581
60.7
RHH5302_R3668
79.1
RHH5238_R3610
67.6
RHH5267_R3639
62.3
Memory CD4 T-cell Th1/Th17 nTPM: 66.5
Samples: 4
Max nTPM: 84.6
Min nTPM: 34.5
RHH5303_R3669
65.9
RHH5211_R3582
34.5
RHH5239_R3611
84.6
RHH5268_R3640
81.0
Memory CD4 T-cell Th17 nTPM: 50.9
Samples: 4
Max nTPM: 65.0
Min nTPM: 25.7
RHH5304_R3670
58.1
RHH5212_R3583
25.7
RHH5240_R3612
65.0
RHH5269_R3641
54.8
Memory CD4 T-cell Th2 nTPM: 68.9
Samples: 4
Max nTPM: 81.6
Min nTPM: 58.2
RHH5305_R3671
71.4
RHH5213_R3584
58.2
RHH5241_R3613
64.3
RHH5270_R3642
81.6
Naive CD4 T-cell nTPM: 45.0
Samples: 4
Max nTPM: 57.2
Min nTPM: 35.8
RHH5306_R3672
47.9
RHH5214_R3585
35.8
RHH5242_R3614
39.1
RHH5271_R3643
57.2
Naive CD8 T-cell nTPM: 46.5
Samples: 4
Max nTPM: 68.7
Min nTPM: 7.1
RHH5201_R3572
46.9
RHH5229_R3601
7.1
RHH5258_R3630
68.7
RHH5287_R3659
63.3
Non-Vd2 gdTCR nTPM: 94.2
Samples: 4
Max nTPM: 114.2
Min nTPM: 80.9
RHH5235_R3607
114.2
RHH5264_R3636
93.1
RHH5207_R3578
88.5
RHH5299_R3665
80.9
T-reg nTPM: 63.4
Samples: 4
Max nTPM: 71.7
Min nTPM: 54.3
RHH5301_R3667
68.6
RHH5237_R3609
59.0
RHH5266_R3638
54.3
RHH5209_R3580
71.7
Terminal effector memory CD4 T-cell nTPM: 52.7
Samples: 2
Max nTPM: 76.0
Min nTPM: 29.4
RHH5243_R3615
29.4
RHH5272_R3644
76.0
Terminal effector memory CD8 T-cell nTPM: 83.8
Samples: 4
Max nTPM: 106.5
Min nTPM: 51.5
RHH5232_R3604
51.5
RHH5204_R3575
106.5
RHH5261_R3633
96.9
RHH5296_R3662
80.2
Vd2 gdTCR nTPM: 110.6
Samples: 4
Max nTPM: 166.8
Min nTPM: 62.8
RHH5234_R3606
80.5
RHH5206_R3577
166.8
RHH5263_R3635
132.2
RHH5298_R3664
62.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
