HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:38.7 nTPM
HPA Brain:35.0 nTPM
GTEx:38.7 nTPM
FANTOM5:22.8 Scaled Tags Per Million
Pig:22.2 nTPM
Mouse:5.7 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.0
Sample id Sample description nTPM
Hippocampus
nTPM: 31.0
2529 Female, age 94, left hemisphere 37.1
1855 Male, age 76, left hemisphere 34.1
2621 Female, age 67, right hemisphere 33.4
1898 Male, age 80, left hemisphere 29.0
1911 Female, age 85, right hemisphere 28.4
2148 Female, age 91, left hemisphere 24.0
Dentate gyrus
nTPM: 24.7
2530 Female, age 94, left hemisphere 34.5
2010 Male, age 76, both hemispheres 25.6
2528 Male, age 74, both hemispheres 24.8
2531 Female, age 67, both hemispheres 24.0
2246 Female, age 85, both hemispheres 21.2
1927 Female, age 91, both hemispheres 17.9
Entorhinal gyrus
nTPM: 35.0
2686 Male, age 75, right hemisphere 44.6
1787 Male, age 76, left hemisphere 40.6
2117 Female, age 91, right hemisphere 38.0
2764 Male, age 80, right hemisphere 33.0
2613 Female, age 94, left hemisphere 27.9
1938 Female, age 85, left hemisphere 25.7
Hippocampus, CA1
nTPM: 23.7
2045 Male, age 76, both hemispheres 27.1
2082 Female, age 91, right hemisphere 26.5
2527 Male, age 74, both hemispheres 25.0
1873 Female, age 85, both hemispheres 23.7
2749 Male, age 80, left hemisphere 16.0
Hippocampus, CA2
nTPM: 27.8
2437 Female, age 94, left hemisphere 39.3
2249 Male, age 74, both hemispheres 31.8
1892 Male, age 76, both hemispheres 27.9
2113 Female, age 91, right hemisphere 26.8
1963 Male, age 80, left hemisphere 20.7
1940 Female, age 85, left hemisphere 20.3
Hippocampus, CA3
nTPM: 22.6
2861 Female, age 67, both hemispheres 31.4
1867 Male, age 76, both hemispheres 29.4
2436 Male, age 74, both hemispheres 22.3
1891 Female, age 85, both hemispheres 21.1
2620 Female, age 94, left hemisphere 17.8
2137 Male, age 80, left hemisphere 13.4
Parahippocampal cortex
nTPM: 30.8
2622 Female, age 67, right hemisphere 39.9
2250 Female, age 67, right hemisphere 38.2
2018 Male, age 76, both hemispheres 36.8
2245 Female, age 91, both hemispheres 31.2
2692 Male, age 74, both hemispheres 30.9
1933 Female, age 85, both hemispheres 29.7
1990 Female, age 91, right hemisphere 28.1
2532 Female, age 72, left hemisphere 26.5
2693 Female, age 94, both hemispheres 23.6
1850 Male, age 80, both hemispheres 23.4
Perirhinal gyrus
nTPM: 29.1
2848 Male, age 76, right hemisphere 39.1
2521 Female, age 94, right hemisphere 28.9
1794 Male, age 80, right hemisphere 28.5
1847 Female, age 91, left hemisphere 26.6
1841 Female, age 85, right hemisphere 22.4
Subiculum
nTPM: 30.3
2729 Female, age 91, right hemisphere 34.5
2042 Male, age 76, both hemispheres 34.1
2619 Male, age 74, both hemispheres 32.9
2438 Female, age 94, left hemisphere 28.3
1901 Male, age 80, both hemispheres 26.7
1977 Female, age 85, both hemispheres 25.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.7
Samples: 197

Max nTPM: 111.9
Min nTPM: 6.3
Std nTPM: 18.6
Median nTPM: 36.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 111.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 106.8
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 98.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 95.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 85.2
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 83.9
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 81.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 78.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 76.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 74.0
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 73.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.8
FF:10153-102I9 76 years, female 26.9
FF:10169-103B7 60 years, female 18.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.2
Pig sample Sample description nTPM
Subiculum
nTPM: 22.3
Samples: 4

Max nTPM: 25.2
Min nTPM: 19.9
Sample A Female 19.9
Sample B Female 20.7
Sample C Male 25.2
Sample D Male 23.2
Dorsal hippocampus
nTPM: 17.5
Samples: 4

Max nTPM: 26.5
Min nTPM: 12.4
Sample A Female 16.1
Sample B Female 15.1
Sample C Male 26.5
Sample D Male 12.4
Entorhinal cortex
nTPM: 20.0
Samples: 4

Max nTPM: 24.6
Min nTPM: 12.4
Sample A Female 23.5
Sample B Female 19.3
Sample C Male 24.6
Sample D Male 12.4
Ventral hippocampus
nTPM: 22.0
Samples: 4

Max nTPM: 33.8
Min nTPM: 14.9
Sample A Female 18.8
Sample B Female 20.5
Sample C Male 33.8
Sample D Male 14.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.7
Samples: 4

Max nTPM: 5.4
Min nTPM: 4.0
Sample A Male 4.0
Sample B Male 4.2
Sample C Female 5.1
Sample D Female 5.4
Hippocampal formation
nTPM: 5.7
Samples: 4

Max nTPM: 6.2
Min nTPM: 5.1
Sample A Male 5.1
Sample B Male 5.4
Sample C Female 6.2
Sample D Female 6.1

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