HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:224.7 nTPM
HPA Brain:219.0 nTPM
GTEx:224.7 nTPM
FANTOM5:269.6 Scaled Tags Per Million
Pig:0.0 nTPM
Mouse:582.2 nTPM
Allen mouse:22.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029196Antibody CAB009528Antibody CAB018699
Glial cells Not detectedNot detectedLow
Neuronal cells HighNot detectedHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 219.0
Sample id Sample description nTPM
Hippocampus
nTPM: 154.6
1898 Male, age 80, left hemisphere 220.1
2621 Female, age 67, right hemisphere 164.1
1855 Male, age 76, left hemisphere 156.0
2529 Female, age 94, left hemisphere 140.1
1911 Female, age 85, right hemisphere 129.3
2148 Female, age 91, left hemisphere 118.3
Dentate gyrus
nTPM: 156.5
1927 Female, age 91, both hemispheres 183.8
2010 Male, age 76, both hemispheres 182.4
2530 Female, age 94, left hemisphere 167.5
2246 Female, age 85, both hemispheres 151.0
2528 Male, age 74, both hemispheres 144.5
2531 Female, age 67, both hemispheres 109.6
Entorhinal gyrus
nTPM: 154.0
2764 Male, age 80, right hemisphere 200.0
1938 Female, age 85, left hemisphere 184.9
1787 Male, age 76, left hemisphere 157.0
2613 Female, age 94, left hemisphere 146.5
2117 Female, age 91, right hemisphere 125.0
2686 Male, age 75, right hemisphere 110.9
Hippocampus, CA1
nTPM: 184.8
2749 Male, age 80, left hemisphere 309.5
1873 Female, age 85, both hemispheres 180.3
2527 Male, age 74, both hemispheres 157.0
2045 Male, age 76, both hemispheres 141.0
2082 Female, age 91, right hemisphere 136.4
Hippocampus, CA2
nTPM: 174.4
1892 Male, age 76, both hemispheres 226.1
1963 Male, age 80, left hemisphere 210.4
2249 Male, age 74, both hemispheres 175.9
1940 Female, age 85, left hemisphere 160.5
2437 Female, age 94, left hemisphere 144.6
2113 Female, age 91, right hemisphere 128.9
Hippocampus, CA3
nTPM: 164.3
2137 Male, age 80, left hemisphere 239.3
2436 Male, age 74, both hemispheres 192.8
1867 Male, age 76, both hemispheres 182.2
1891 Female, age 85, both hemispheres 145.1
2620 Female, age 94, left hemisphere 132.9
2861 Female, age 67, both hemispheres 93.9
Parahippocampal cortex
nTPM: 158.0
1850 Male, age 80, both hemispheres 233.8
1933 Female, age 85, both hemispheres 174.3
1990 Female, age 91, right hemisphere 173.3
2532 Female, age 72, left hemisphere 166.2
2245 Female, age 91, both hemispheres 164.4
2250 Female, age 67, right hemisphere 159.4
2018 Male, age 76, both hemispheres 157.5
2693 Female, age 94, both hemispheres 135.3
2692 Male, age 74, both hemispheres 118.2
2622 Female, age 67, right hemisphere 97.4
Perirhinal gyrus
nTPM: 219.0
1847 Female, age 91, left hemisphere 253.7
1794 Male, age 80, right hemisphere 250.3
1841 Female, age 85, right hemisphere 228.9
2521 Female, age 94, right hemisphere 191.0
2848 Male, age 76, right hemisphere 171.1
Subiculum
nTPM: 145.1
1901 Male, age 80, both hemispheres 184.2
1977 Female, age 85, both hemispheres 176.4
2438 Female, age 94, left hemisphere 142.9
2042 Male, age 76, both hemispheres 136.7
2619 Male, age 74, both hemispheres 128.5
2729 Female, age 91, right hemisphere 101.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 224.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 224.7
Samples: 197

Max nTPM: 494.7
Min nTPM: 109.9
Std nTPM: 81.5
Median nTPM: 204.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 494.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 464.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 448.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 436.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 430.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 415.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 393.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 382.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 373.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 368.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 366.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 269.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 269.6
FF:10169-103B7 60 years, female 392.5
FF:10153-102I9 76 years, female 146.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.0
Pig sample Sample description nTPM
Subiculum
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Dorsal hippocampus
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.1
Sample D Male 0.0
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.1
Ventral hippocampus
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 582.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 581.6
Samples: 4

Max nTPM: 614.3
Min nTPM: 550.8
Sample A Male 550.8
Sample B Male 614.3
Sample C Female 590.8
Sample D Female 570.3
Hippocampal formation
nTPM: 582.1
Samples: 4

Max nTPM: 667.7
Min nTPM: 546.4
Sample A Male 667.7
Sample B Male 546.4
Sample C Female 550.2
Sample D Female 564.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.4
655501 Antisense, RP_040922_01_C02, Mouse strain C57BL/6J (56 days, male) 25.7
67979021 Antisense, RP_040923_02_A01, Mouse strain C57BL/6J (56 days, male) 19.0

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