HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:93.8 nTPM
HPA Brain:87.2 nTPM
GTEx:93.8 nTPM
FANTOM5:85.4 Scaled Tags Per Million
Pig:69.6 nTPM
Mouse:13.5 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042596Antibody HPA048072
Glial cells Not detectedMedium
Neuronal cells LowMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 87.2
Sample id Sample description nTPM
Hippocampus
nTPM: 80.1
1898 Male, age 80, left hemisphere 91.5
2621 Female, age 67, right hemisphere 83.9
1855 Male, age 76, left hemisphere 79.9
2529 Female, age 94, left hemisphere 78.5
1911 Female, age 85, right hemisphere 75.1
2148 Female, age 91, left hemisphere 71.9
Dentate gyrus
nTPM: 78.7
2530 Female, age 94, left hemisphere 90.8
1927 Female, age 91, both hemispheres 87.6
2010 Male, age 76, both hemispheres 84.0
2531 Female, age 67, both hemispheres 72.4
2246 Female, age 85, both hemispheres 72.1
2528 Male, age 74, both hemispheres 65.0
Entorhinal gyrus
nTPM: 87.2
1938 Female, age 85, left hemisphere 95.9
1787 Male, age 76, left hemisphere 92.4
2764 Male, age 80, right hemisphere 90.9
2613 Female, age 94, left hemisphere 90.2
2686 Male, age 75, right hemisphere 84.6
2117 Female, age 91, right hemisphere 69.0
Hippocampus, CA1
nTPM: 85.5
2749 Male, age 80, left hemisphere 112.8
2045 Male, age 76, both hemispheres 87.7
1873 Female, age 85, both hemispheres 87.6
2082 Female, age 91, right hemisphere 71.4
2527 Male, age 74, both hemispheres 68.1
Hippocampus, CA2
nTPM: 75.3
1963 Male, age 80, left hemisphere 88.5
1892 Male, age 76, both hemispheres 87.4
2437 Female, age 94, left hemisphere 74.5
1940 Female, age 85, left hemisphere 69.3
2113 Female, age 91, right hemisphere 66.1
2249 Male, age 74, both hemispheres 65.9
Hippocampus, CA3
nTPM: 83.1
2620 Female, age 94, left hemisphere 97.0
2861 Female, age 67, both hemispheres 92.8
2137 Male, age 80, left hemisphere 85.3
1867 Male, age 76, both hemispheres 85.2
1891 Female, age 85, both hemispheres 73.2
2436 Male, age 74, both hemispheres 65.1
Parahippocampal cortex
nTPM: 79.0
1933 Female, age 85, both hemispheres 87.3
2622 Female, age 67, right hemisphere 85.6
2245 Female, age 91, both hemispheres 85.2
2018 Male, age 76, both hemispheres 80.6
2692 Male, age 74, both hemispheres 78.4
2250 Female, age 67, right hemisphere 77.9
1850 Male, age 80, both hemispheres 77.1
1990 Female, age 91, right hemisphere 77.0
2532 Female, age 72, left hemisphere 76.9
2693 Female, age 94, both hemispheres 63.9
Perirhinal gyrus
nTPM: 83.8
1794 Male, age 80, right hemisphere 96.3
1847 Female, age 91, left hemisphere 91.7
1841 Female, age 85, right hemisphere 84.2
2848 Male, age 76, right hemisphere 79.0
2521 Female, age 94, right hemisphere 67.9
Subiculum
nTPM: 76.7
2042 Male, age 76, both hemispheres 86.3
2619 Male, age 74, both hemispheres 84.0
1977 Female, age 85, both hemispheres 79.9
1901 Male, age 80, both hemispheres 79.6
2729 Female, age 91, right hemisphere 67.9
2438 Female, age 94, left hemisphere 62.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 93.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 93.8
Samples: 197

Max nTPM: 183.2
Min nTPM: 15.2
Std nTPM: 28.2
Median nTPM: 91.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 183.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 179.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 176.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 176.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 175.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 174.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 173.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 159.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 157.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 143.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 139.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 85.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 85.4
FF:10169-103B7 60 years, female 99.7
FF:10153-102I9 76 years, female 71.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 69.6
Pig sample Sample description nTPM
Subiculum
nTPM: 60.1
Samples: 4

Max nTPM: 82.9
Min nTPM: 43.8
Sample A Female 82.9
Sample B Female 61.2
Sample C Male 43.8
Sample D Male 52.6
Dorsal hippocampus
nTPM: 69.6
Samples: 4

Max nTPM: 92.1
Min nTPM: 54.8
Sample A Female 92.1
Sample B Female 73.3
Sample C Male 58.0
Sample D Male 54.8
Entorhinal cortex
nTPM: 60.7
Samples: 4

Max nTPM: 80.0
Min nTPM: 40.0
Sample A Female 52.6
Sample B Female 70.3
Sample C Male 80.0
Sample D Male 40.0
Ventral hippocampus
nTPM: 60.7
Samples: 4

Max nTPM: 77.3
Min nTPM: 44.6
Sample A Female 65.1
Sample B Female 55.7
Sample C Male 77.3
Sample D Male 44.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.5
Samples: 4

Max nTPM: 16.0
Min nTPM: 11.6
Sample A Male 13.7
Sample B Male 16.0
Sample C Female 11.6
Sample D Female 12.7
Hippocampal formation
nTPM: 12.3
Samples: 4

Max nTPM: 13.9
Min nTPM: 10.9
Sample A Male 11.2
Sample B Male 13.3
Sample C Female 10.9
Sample D Female 13.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
71493026 Antisense, RP_050913_02_A06, Mouse strain C57BL/6J (56 days, male) 1.5

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