HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:88.4 nTPM
HPA Brain:63.6 nTPM
GTEx:88.4 nTPM
FANTOM5:262.9 Scaled Tags Per Million
Pig:36.7 nTPM
Mouse:115.7 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051248
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 63.6
Sample id Sample description nTPM
Hippocampus
nTPM: 63.6
1898 Male, age 80, left hemisphere 81.7
1855 Male, age 76, left hemisphere 74.5
1911 Female, age 85, right hemisphere 66.5
2529 Female, age 94, left hemisphere 57.9
2621 Female, age 67, right hemisphere 51.8
2148 Female, age 91, left hemisphere 49.2
Dentate gyrus
nTPM: 57.9
2010 Male, age 76, both hemispheres 67.8
1927 Female, age 91, both hemispheres 63.8
2528 Male, age 74, both hemispheres 61.8
2530 Female, age 94, left hemisphere 57.7
2246 Female, age 85, both hemispheres 57.4
2531 Female, age 67, both hemispheres 38.9
Entorhinal gyrus
nTPM: 44.7
2117 Female, age 91, right hemisphere 60.3
1938 Female, age 85, left hemisphere 53.8
1787 Male, age 76, left hemisphere 50.3
2686 Male, age 75, right hemisphere 39.0
2764 Male, age 80, right hemisphere 34.2
2613 Female, age 94, left hemisphere 30.4
Hippocampus, CA1
nTPM: 62.7
2749 Male, age 80, left hemisphere 77.8
1873 Female, age 85, both hemispheres 67.0
2045 Male, age 76, both hemispheres 62.0
2527 Male, age 74, both hemispheres 59.6
2082 Female, age 91, right hemisphere 47.1
Hippocampus, CA2
nTPM: 59.9
1892 Male, age 76, both hemispheres 74.7
2249 Male, age 74, both hemispheres 65.7
1940 Female, age 85, left hemisphere 59.5
1963 Male, age 80, left hemisphere 57.4
2113 Female, age 91, right hemisphere 51.7
2437 Female, age 94, left hemisphere 50.3
Hippocampus, CA3
nTPM: 56.8
2137 Male, age 80, left hemisphere 76.2
1867 Male, age 76, both hemispheres 68.7
2436 Male, age 74, both hemispheres 66.6
1891 Female, age 85, both hemispheres 58.4
2620 Female, age 94, left hemisphere 37.6
2861 Female, age 67, both hemispheres 33.5
Parahippocampal cortex
nTPM: 50.6
2250 Female, age 67, right hemisphere 61.6
2018 Male, age 76, both hemispheres 57.9
1850 Male, age 80, both hemispheres 55.1
2693 Female, age 94, both hemispheres 52.2
2245 Female, age 91, both hemispheres 51.9
1933 Female, age 85, both hemispheres 50.7
1990 Female, age 91, right hemisphere 48.5
2692 Male, age 74, both hemispheres 46.2
2532 Female, age 72, left hemisphere 43.1
2622 Female, age 67, right hemisphere 38.9
Perirhinal gyrus
nTPM: 54.5
1841 Female, age 85, right hemisphere 60.7
1794 Male, age 80, right hemisphere 56.1
2521 Female, age 94, right hemisphere 54.0
1847 Female, age 91, left hemisphere 51.8
2848 Male, age 76, right hemisphere 49.9
Subiculum
nTPM: 53.2
2042 Male, age 76, both hemispheres 63.1
2729 Female, age 91, right hemisphere 61.8
1901 Male, age 80, both hemispheres 58.6
2619 Male, age 74, both hemispheres 48.2
1977 Female, age 85, both hemispheres 47.0
2438 Female, age 94, left hemisphere 40.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 88.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 88.4
Samples: 197

Max nTPM: 169.7
Min nTPM: 37.3
Std nTPM: 18.8
Median nTPM: 86.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 169.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 158.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 154.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 149.8
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 138.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 128.8
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 123.3
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 121.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 120.5
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 120.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 119.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 262.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 262.9
FF:10169-103B7 60 years, female 271.0
FF:10153-102I9 76 years, female 254.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.7
Pig sample Sample description nTPM
Subiculum
nTPM: 36.7
Samples: 4

Max nTPM: 41.2
Min nTPM: 33.0
Sample A Female 37.8
Sample B Female 33.0
Sample C Male 41.2
Sample D Male 34.8
Dorsal hippocampus
nTPM: 32.1
Samples: 4

Max nTPM: 36.8
Min nTPM: 25.2
Sample A Female 36.8
Sample B Female 31.7
Sample C Male 34.6
Sample D Male 25.2
Entorhinal cortex
nTPM: 25.2
Samples: 4

Max nTPM: 28.3
Min nTPM: 21.1
Sample A Female 24.2
Sample B Female 27.2
Sample C Male 28.3
Sample D Male 21.1
Ventral hippocampus
nTPM: 35.2
Samples: 4

Max nTPM: 42.1
Min nTPM: 25.6
Sample A Female 42.1
Sample B Female 38.5
Sample C Male 34.5
Sample D Male 25.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 115.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 81.5
Samples: 4

Max nTPM: 95.7
Min nTPM: 73.3
Sample A Male 76.9
Sample B Male 73.3
Sample C Female 95.7
Sample D Female 80.0
Hippocampal formation
nTPM: 115.7
Samples: 4

Max nTPM: 120.3
Min nTPM: 110.4
Sample A Male 120.3
Sample B Male 114.7
Sample C Female 117.3
Sample D Female 110.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70439141 Antisense, RP_050614_03_C06, Mouse strain C57BL/6J (56 days, male) 0.2

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