HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:79.5 nTPM
HPA Brain:93.6 nTPM
GTEx:79.5 nTPM
FANTOM5:100.9 Scaled Tags Per Million
Pig:141.6 nTPM
Mouse:225.1 nTPM
Allen mouse:15.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030124
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 93.6
Sample id Sample description nTPM
Hippocampus
nTPM: 83.9
1898 Male, age 80, left hemisphere 98.7
1855 Male, age 76, left hemisphere 91.7
2529 Female, age 94, left hemisphere 81.9
2621 Female, age 67, right hemisphere 81.4
1911 Female, age 85, right hemisphere 80.0
2148 Female, age 91, left hemisphere 69.4
Dentate gyrus
nTPM: 77.3
2010 Male, age 76, both hemispheres 103.6
2246 Female, age 85, both hemispheres 79.5
2528 Male, age 74, both hemispheres 78.4
1927 Female, age 91, both hemispheres 74.4
2530 Female, age 94, left hemisphere 73.1
2531 Female, age 67, both hemispheres 54.8
Entorhinal gyrus
nTPM: 80.4
1938 Female, age 85, left hemisphere 91.2
2117 Female, age 91, right hemisphere 90.5
1787 Male, age 76, left hemisphere 87.9
2764 Male, age 80, right hemisphere 80.3
2613 Female, age 94, left hemisphere 68.8
2686 Male, age 75, right hemisphere 63.6
Hippocampus, CA1
nTPM: 86.4
2749 Male, age 80, left hemisphere 107.7
2045 Male, age 76, both hemispheres 89.4
2082 Female, age 91, right hemisphere 79.6
1873 Female, age 85, both hemispheres 77.9
2527 Male, age 74, both hemispheres 77.6
Hippocampus, CA2
nTPM: 93.6
1892 Male, age 76, both hemispheres 126.1
1963 Male, age 80, left hemisphere 99.3
1940 Female, age 85, left hemisphere 93.2
2249 Male, age 74, both hemispheres 85.8
2113 Female, age 91, right hemisphere 80.1
2437 Female, age 94, left hemisphere 77.0
Hippocampus, CA3
nTPM: 85.2
1867 Male, age 76, both hemispheres 136.0
2137 Male, age 80, left hemisphere 101.4
1891 Female, age 85, both hemispheres 86.0
2436 Male, age 74, both hemispheres 73.1
2861 Female, age 67, both hemispheres 59.6
2620 Female, age 94, left hemisphere 55.0
Parahippocampal cortex
nTPM: 79.4
2018 Male, age 76, both hemispheres 97.8
1850 Male, age 80, both hemispheres 87.6
1933 Female, age 85, both hemispheres 87.3
2250 Female, age 67, right hemisphere 84.6
2532 Female, age 72, left hemisphere 82.7
1990 Female, age 91, right hemisphere 80.9
2245 Female, age 91, both hemispheres 76.3
2692 Male, age 74, both hemispheres 72.0
2693 Female, age 94, both hemispheres 67.7
2622 Female, age 67, right hemisphere 56.9
Perirhinal gyrus
nTPM: 89.2
1847 Female, age 91, left hemisphere 102.6
2521 Female, age 94, right hemisphere 92.0
1794 Male, age 80, right hemisphere 86.2
1841 Female, age 85, right hemisphere 84.9
2848 Male, age 76, right hemisphere 80.1
Subiculum
nTPM: 87.4
2042 Male, age 76, both hemispheres 104.8
1901 Male, age 80, both hemispheres 94.4
1977 Female, age 85, both hemispheres 88.4
2438 Female, age 94, left hemisphere 81.4
2619 Male, age 74, both hemispheres 79.0
2729 Female, age 91, right hemisphere 76.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 79.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 79.5
Samples: 197

Max nTPM: 126.1
Min nTPM: 48.4
Std nTPM: 13.2
Median nTPM: 78.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 126.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 118.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 118.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 117.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 114.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 112.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 110.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 108.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 107.4
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 105.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 104.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.9
FF:10169-103B7 60 years, female 102.8
FF:10153-102I9 76 years, female 98.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 141.6
Pig sample Sample description nTPM
Subiculum
nTPM: 119.0
Samples: 4

Max nTPM: 154.6
Min nTPM: 102.1
Sample A Female 154.6
Sample B Female 108.8
Sample C Male 102.1
Sample D Male 110.5
Dorsal hippocampus
nTPM: 141.6
Samples: 4

Max nTPM: 182.3
Min nTPM: 106.9
Sample A Female 182.3
Sample B Female 130.4
Sample C Male 146.8
Sample D Male 106.9
Entorhinal cortex
nTPM: 119.7
Samples: 4

Max nTPM: 137.6
Min nTPM: 96.0
Sample A Female 133.4
Sample B Female 137.6
Sample C Male 111.8
Sample D Male 96.0
Ventral hippocampus
nTPM: 112.6
Samples: 4

Max nTPM: 141.9
Min nTPM: 84.0
Sample A Female 107.1
Sample B Female 84.0
Sample C Male 117.2
Sample D Male 141.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 225.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 178.4
Samples: 4

Max nTPM: 191.0
Min nTPM: 165.9
Sample A Male 165.9
Sample B Male 168.3
Sample C Female 191.0
Sample D Female 188.3
Hippocampal formation
nTPM: 225.1
Samples: 4

Max nTPM: 243.7
Min nTPM: 213.1
Sample A Male 220.1
Sample B Male 223.5
Sample C Female 243.7
Sample D Female 213.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.4
76081921 Antisense, RP_060626_01_A01, Mouse strain C57BL/6J (56 days, male) 16.9
323396 Antisense, RP_040617_01_A03, Mouse strain C57BL/6J (56 days, male) 13.9

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