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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
227.7
nTPM
Monaco:
239.1
nTPM
Schmiedel:
101.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
227.7
HPA sample
nTPM
gdT-cell nTPM: 122.4
Samples: 6
Max nTPM: 188.7
Min nTPM: 68.2
P10809_1007
68.2
P10809_1022
188.7
P10809_1041
136.6
P10809_1060
100.8
P10809_1077
112.9
P10809_1098
127.4
MAIT T-cell nTPM: 138.1
Samples: 6
Max nTPM: 233.2
Min nTPM: 88.0
P10809_1006
88.0
P10809_1024
233.2
P10809_1043
116.5
P10809_1062
121.2
P10809_1083
107.7
P10809_1097
161.7
Memory CD4 T-cell nTPM: 171.9
Samples: 6
Max nTPM: 213.6
Min nTPM: 126.5
P10809_1014
126.5
P10809_1026
175.6
P10809_1045
213.6
P10809_1064
154.5
P10809_1086
182.7
P10809_1113
178.4
Memory CD8 T-cell nTPM: 131.2
Samples: 5
Max nTPM: 147.6
Min nTPM: 91.3
P10809_1012
91.3
P10809_1027
143.2
P10809_1046
146.1
P10809_1065
128.0
P10809_1111
147.6
Naive CD4 T-cell nTPM: 227.7
Samples: 6
Max nTPM: 321.8
Min nTPM: 141.0
P10809_1015
141.0
P10809_1030
240.6
P10809_1049
321.8
P10809_1068
211.0
P10809_1085
244.4
P10809_1112
207.4
Naive CD8 T-cell nTPM: 168.8
Samples: 6
Max nTPM: 219.4
Min nTPM: 120.7
P10809_1016
124.6
P10809_1031
212.3
P10809_1050
167.8
P10809_1069
167.7
P10809_1087
120.7
P10809_1110
219.4
T-reg nTPM: 204.6
Samples: 6
Max nTPM: 247.3
Min nTPM: 142.1
P10809_1018
142.1
P10809_1037
222.0
P10809_1056
247.3
P10809_1075
173.0
P10809_1094
232.5
P10809_1106
210.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
239.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 183.5
Samples: 4
Max nTPM: 202.0
Min nTPM: 170.9
RHH5202_R3573
202.0
RHH5230_R3602
179.4
RHH5259_R3631
181.7
RHH5288_R3660
170.9
Effector memory CD8 T-cell nTPM: 164.2
Samples: 4
Max nTPM: 237.7
Min nTPM: 127.7
RHH5203_R3574
127.7
RHH5231_R3603
142.7
RHH5260_R3632
148.7
RHH5289_R3661
237.7
MAIT T-cell nTPM: 146.1
Samples: 4
Max nTPM: 155.6
Min nTPM: 140.4
RHH5233_R3605
155.6
RHH5205_R3576
147.3
RHH5262_R3634
141.2
RHH5297_R3663
140.4
Memory CD4 T-cell TFH nTPM: 209.7
Samples: 4
Max nTPM: 274.9
Min nTPM: 131.4
RHH5300_R3666
131.4
RHH5236_R3608
274.9
RHH5265_R3637
195.5
RHH5208_R3579
237.0
Memory CD4 T-cell Th1 nTPM: 178.1
Samples: 4
Max nTPM: 197.7
Min nTPM: 149.3
RHH5210_R3581
197.7
RHH5302_R3668
172.3
RHH5238_R3610
149.3
RHH5267_R3639
193.1
Memory CD4 T-cell Th1/Th17 nTPM: 217.1
Samples: 4
Max nTPM: 250.4
Min nTPM: 197.0
RHH5303_R3669
200.7
RHH5211_R3582
220.1
RHH5239_R3611
250.4
RHH5268_R3640
197.0
Memory CD4 T-cell Th17 nTPM: 210.6
Samples: 4
Max nTPM: 265.4
Min nTPM: 184.1
RHH5304_R3670
186.5
RHH5212_R3583
184.1
RHH5240_R3612
265.4
RHH5269_R3641
206.2
Memory CD4 T-cell Th2 nTPM: 209.3
Samples: 4
Max nTPM: 259.3
Min nTPM: 175.1
RHH5305_R3671
181.4
RHH5213_R3584
221.2
RHH5241_R3613
259.3
RHH5270_R3642
175.1
Naive CD4 T-cell nTPM: 214.7
Samples: 4
Max nTPM: 238.0
Min nTPM: 184.1
RHH5306_R3672
184.1
RHH5214_R3585
230.3
RHH5242_R3614
206.3
RHH5271_R3643
238.0
Naive CD8 T-cell nTPM: 239.1
Samples: 4
Max nTPM: 283.3
Min nTPM: 213.4
RHH5201_R3572
283.3
RHH5229_R3601
213.4
RHH5258_R3630
229.3
RHH5287_R3659
230.5
Non-Vd2 gdTCR nTPM: 136.2
Samples: 4
Max nTPM: 185.4
Min nTPM: 115.3
RHH5235_R3607
185.4
RHH5264_R3636
116.2
RHH5207_R3578
127.8
RHH5299_R3665
115.3
T-reg nTPM: 204.4
Samples: 4
Max nTPM: 243.2
Min nTPM: 170.5
RHH5301_R3667
170.5
RHH5237_R3609
243.2
RHH5266_R3638
188.1
RHH5209_R3580
215.9
Terminal effector memory CD4 T-cell nTPM: 132.1
Samples: 2
Max nTPM: 133.8
Min nTPM: 130.4
RHH5243_R3615
130.4
RHH5272_R3644
133.8
Terminal effector memory CD8 T-cell nTPM: 134.2
Samples: 4
Max nTPM: 170.8
Min nTPM: 83.7
RHH5232_R3604
122.4
RHH5204_R3575
83.7
RHH5261_R3633
170.8
RHH5296_R3662
159.9
Vd2 gdTCR nTPM: 145.2
Samples: 4
Max nTPM: 181.3
Min nTPM: 120.7
RHH5234_R3606
135.0
RHH5206_R3577
120.7
RHH5263_R3635
181.3
RHH5298_R3664
143.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.