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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
53.0
nTPM
Monaco:
189.6
nTPM
Schmiedel:
35.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
53.0
HPA sample
nTPM
gdT-cell nTPM: 53.0
Samples: 6
Max nTPM: 65.0
Min nTPM: 41.4
P10809_1007
49.5
P10809_1022
59.8
P10809_1041
65.0
P10809_1060
45.0
P10809_1077
41.4
P10809_1098
57.4
MAIT T-cell nTPM: 16.0
Samples: 6
Max nTPM: 28.0
Min nTPM: 6.5
P10809_1006
11.4
P10809_1024
6.5
P10809_1043
28.0
P10809_1062
12.5
P10809_1083
15.3
P10809_1097
22.1
Memory CD4 T-cell nTPM: 24.2
Samples: 6
Max nTPM: 47.2
Min nTPM: 9.0
P10809_1014
19.2
P10809_1026
27.5
P10809_1045
47.2
P10809_1064
31.2
P10809_1086
9.0
P10809_1113
10.8
Memory CD8 T-cell nTPM: 36.1
Samples: 5
Max nTPM: 64.9
Min nTPM: 20.7
P10809_1012
20.7
P10809_1027
25.4
P10809_1046
64.9
P10809_1065
38.7
P10809_1111
30.8
Naive CD4 T-cell nTPM: 12.9
Samples: 6
Max nTPM: 18.8
Min nTPM: 9.6
P10809_1015
11.0
P10809_1030
14.7
P10809_1049
18.8
P10809_1068
10.0
P10809_1085
13.2
P10809_1112
9.6
Naive CD8 T-cell nTPM: 16.6
Samples: 6
Max nTPM: 25.6
Min nTPM: 5.2
P10809_1016
5.2
P10809_1031
16.3
P10809_1050
25.6
P10809_1069
19.5
P10809_1087
22.2
P10809_1110
11.0
T-reg nTPM: 11.1
Samples: 6
Max nTPM: 21.9
Min nTPM: 3.2
P10809_1018
6.8
P10809_1037
6.3
P10809_1056
21.9
P10809_1075
7.9
P10809_1094
3.2
P10809_1106
20.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
189.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 123.5
Samples: 4
Max nTPM: 195.3
Min nTPM: 42.8
RHH5202_R3573
42.8
RHH5230_R3602
195.3
RHH5259_R3631
132.4
RHH5288_R3660
123.6
Effector memory CD8 T-cell nTPM: 143.2
Samples: 4
Max nTPM: 235.5
Min nTPM: 97.2
RHH5203_R3574
97.2
RHH5231_R3603
120.9
RHH5260_R3632
119.2
RHH5289_R3661
235.5
MAIT T-cell nTPM: 111.9
Samples: 4
Max nTPM: 161.3
Min nTPM: 79.6
RHH5233_R3605
100.1
RHH5205_R3576
79.6
RHH5262_R3634
161.3
RHH5297_R3663
106.7
Memory CD4 T-cell TFH nTPM: 96.3
Samples: 4
Max nTPM: 141.5
Min nTPM: 26.6
RHH5300_R3666
141.5
RHH5236_R3608
125.2
RHH5265_R3637
91.8
RHH5208_R3579
26.6
Memory CD4 T-cell Th1 nTPM: 144.5
Samples: 4
Max nTPM: 244.9
Min nTPM: 41.5
RHH5210_R3581
41.5
RHH5302_R3668
85.9
RHH5238_R3610
244.9
RHH5267_R3639
205.8
Memory CD4 T-cell Th1/Th17 nTPM: 141.8
Samples: 4
Max nTPM: 235.5
Min nTPM: 75.4
RHH5303_R3669
75.4
RHH5211_R3582
107.7
RHH5239_R3611
148.6
RHH5268_R3640
235.5
Memory CD4 T-cell Th17 nTPM: 120.7
Samples: 4
Max nTPM: 203.2
Min nTPM: 62.4
RHH5304_R3670
72.7
RHH5212_R3583
144.3
RHH5240_R3612
62.4
RHH5269_R3641
203.2
Memory CD4 T-cell Th2 nTPM: 118.8
Samples: 4
Max nTPM: 181.7
Min nTPM: 82.1
RHH5305_R3671
82.1
RHH5213_R3584
114.0
RHH5241_R3613
97.2
RHH5270_R3642
181.7
Naive CD4 T-cell nTPM: 94.3
Samples: 4
Max nTPM: 114.2
Min nTPM: 72.5
RHH5306_R3672
110.3
RHH5214_R3585
80.1
RHH5242_R3614
72.5
RHH5271_R3643
114.2
Naive CD8 T-cell nTPM: 43.6
Samples: 4
Max nTPM: 58.0
Min nTPM: 29.5
RHH5201_R3572
29.5
RHH5229_R3601
58.0
RHH5258_R3630
34.9
RHH5287_R3659
51.8
Non-Vd2 gdTCR nTPM: 189.6
Samples: 4
Max nTPM: 264.8
Min nTPM: 98.5
RHH5235_R3607
216.9
RHH5264_R3636
98.5
RHH5207_R3578
178.2
RHH5299_R3665
264.8
T-reg nTPM: 122.6
Samples: 4
Max nTPM: 176.7
Min nTPM: 90.3
RHH5301_R3667
111.4
RHH5237_R3609
176.7
RHH5266_R3638
111.9
RHH5209_R3580
90.3
Terminal effector memory CD4 T-cell nTPM: 175.0
Samples: 2
Max nTPM: 216.9
Min nTPM: 133.1
RHH5243_R3615
216.9
RHH5272_R3644
133.1
Terminal effector memory CD8 T-cell nTPM: 185.6
Samples: 4
Max nTPM: 273.7
Min nTPM: 128.5
RHH5232_R3604
204.3
RHH5204_R3575
128.5
RHH5261_R3633
136.0
RHH5296_R3662
273.7
Vd2 gdTCR nTPM: 146.7
Samples: 4
Max nTPM: 209.3
Min nTPM: 82.6
RHH5234_R3606
148.2
RHH5206_R3577
146.7
RHH5263_R3635
82.6
RHH5298_R3664
209.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
