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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
60.6
nTPM
Monaco:
115.9
nTPM
Schmiedel:
122.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
60.6
HPA sample
nTPM
gdT-cell nTPM: 35.4
Samples: 6
Max nTPM: 44.6
Min nTPM: 13.3
P10809_1007
13.3
P10809_1022
43.0
P10809_1041
41.8
P10809_1060
36.2
P10809_1077
44.6
P10809_1098
33.2
MAIT T-cell nTPM: 18.1
Samples: 6
Max nTPM: 26.2
Min nTPM: 8.5
P10809_1006
8.5
P10809_1024
22.8
P10809_1043
26.2
P10809_1062
18.2
P10809_1083
16.5
P10809_1097
16.6
Memory CD4 T-cell nTPM: 27.3
Samples: 6
Max nTPM: 33.9
Min nTPM: 12.5
P10809_1014
12.5
P10809_1026
29.3
P10809_1045
32.4
P10809_1064
33.9
P10809_1086
30.1
P10809_1113
25.5
Memory CD8 T-cell nTPM: 37.6
Samples: 5
Max nTPM: 56.0
Min nTPM: 12.1
P10809_1012
12.1
P10809_1027
45.2
P10809_1046
56.0
P10809_1065
34.4
P10809_1111
40.5
Naive CD4 T-cell nTPM: 18.5
Samples: 6
Max nTPM: 26.6
Min nTPM: 9.1
P10809_1015
10.6
P10809_1030
9.1
P10809_1049
21.0
P10809_1068
26.6
P10809_1085
23.1
P10809_1112
20.4
Naive CD8 T-cell nTPM: 27.9
Samples: 6
Max nTPM: 47.2
Min nTPM: 10.6
P10809_1016
10.6
P10809_1031
24.5
P10809_1050
32.5
P10809_1069
47.2
P10809_1087
32.5
P10809_1110
20.2
T-reg nTPM: 60.6
Samples: 6
Max nTPM: 92.7
Min nTPM: 17.5
P10809_1018
17.5
P10809_1037
62.1
P10809_1056
92.7
P10809_1075
63.4
P10809_1094
60.7
P10809_1106
67.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
115.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 86.7
Samples: 4
Max nTPM: 98.3
Min nTPM: 63.4
RHH5202_R3573
63.4
RHH5230_R3602
96.1
RHH5259_R3631
98.3
RHH5288_R3660
88.9
Effector memory CD8 T-cell nTPM: 78.3
Samples: 4
Max nTPM: 100.6
Min nTPM: 60.9
RHH5203_R3574
77.2
RHH5231_R3603
60.9
RHH5260_R3632
74.3
RHH5289_R3661
100.6
MAIT T-cell nTPM: 50.4
Samples: 4
Max nTPM: 68.0
Min nTPM: 37.8
RHH5233_R3605
42.3
RHH5205_R3576
68.0
RHH5262_R3634
37.8
RHH5297_R3663
53.4
Memory CD4 T-cell TFH nTPM: 54.3
Samples: 4
Max nTPM: 79.5
Min nTPM: 37.6
RHH5300_R3666
79.5
RHH5236_R3608
53.0
RHH5265_R3637
47.2
RHH5208_R3579
37.6
Memory CD4 T-cell Th1 nTPM: 88.3
Samples: 4
Max nTPM: 105.2
Min nTPM: 79.2
RHH5210_R3581
83.5
RHH5302_R3668
85.3
RHH5238_R3610
105.2
RHH5267_R3639
79.2
Memory CD4 T-cell Th1/Th17 nTPM: 55.1
Samples: 4
Max nTPM: 81.3
Min nTPM: 35.4
RHH5303_R3669
39.5
RHH5211_R3582
35.4
RHH5239_R3611
81.3
RHH5268_R3640
64.3
Memory CD4 T-cell Th17 nTPM: 52.3
Samples: 4
Max nTPM: 75.0
Min nTPM: 37.9
RHH5304_R3670
53.7
RHH5212_R3583
42.5
RHH5240_R3612
37.9
RHH5269_R3641
75.0
Memory CD4 T-cell Th2 nTPM: 74.2
Samples: 4
Max nTPM: 88.1
Min nTPM: 57.5
RHH5305_R3671
75.8
RHH5213_R3584
57.5
RHH5241_R3613
75.2
RHH5270_R3642
88.1
Naive CD4 T-cell nTPM: 69.2
Samples: 4
Max nTPM: 84.2
Min nTPM: 57.5
RHH5306_R3672
84.2
RHH5214_R3585
57.5
RHH5242_R3614
64.7
RHH5271_R3643
70.4
Naive CD8 T-cell nTPM: 67.4
Samples: 4
Max nTPM: 88.8
Min nTPM: 43.8
RHH5201_R3572
54.3
RHH5229_R3601
43.8
RHH5258_R3630
82.5
RHH5287_R3659
88.8
Non-Vd2 gdTCR nTPM: 116.0
Samples: 4
Max nTPM: 153.5
Min nTPM: 97.5
RHH5235_R3607
114.8
RHH5264_R3636
97.5
RHH5207_R3578
98.1
RHH5299_R3665
153.5
T-reg nTPM: 89.2
Samples: 4
Max nTPM: 103.9
Min nTPM: 77.8
RHH5301_R3667
103.9
RHH5237_R3609
94.5
RHH5266_R3638
80.6
RHH5209_R3580
77.8
Terminal effector memory CD4 T-cell nTPM: 83.0
Samples: 2
Max nTPM: 99.9
Min nTPM: 66.1
RHH5243_R3615
99.9
RHH5272_R3644
66.1
Terminal effector memory CD8 T-cell nTPM: 98.2
Samples: 4
Max nTPM: 101.7
Min nTPM: 94.9
RHH5232_R3604
95.5
RHH5204_R3575
101.7
RHH5261_R3633
100.7
RHH5296_R3662
94.9
Vd2 gdTCR nTPM: 60.1
Samples: 4
Max nTPM: 87.7
Min nTPM: 27.7
RHH5234_R3606
76.0
RHH5206_R3577
27.7
RHH5263_R3635
48.9
RHH5298_R3664
87.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
