HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:13.6 nTPM
HPA Brain:42.8 nTPM
GTEx:13.6 nTPM
FANTOM5:38.8 Scaled Tags Per Million
Pig:19.3 nTPM
Mouse:21.1 nTPM
Allen mouse:8.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044878
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.8
Sample id Sample description nTPM
Hippocampus
nTPM: 37.2
2529 Female, age 94, left hemisphere 41.0
1898 Male, age 80, left hemisphere 39.5
2621 Female, age 67, right hemisphere 38.5
2148 Female, age 91, left hemisphere 36.3
1855 Male, age 76, left hemisphere 36.0
1911 Female, age 85, right hemisphere 32.2
Dentate gyrus
nTPM: 35.9
2010 Male, age 76, both hemispheres 36.9
2530 Female, age 94, left hemisphere 36.9
2531 Female, age 67, both hemispheres 36.7
1927 Female, age 91, both hemispheres 35.4
2246 Female, age 85, both hemispheres 35.1
2528 Male, age 74, both hemispheres 34.4
Entorhinal gyrus
nTPM: 40.5
2764 Male, age 80, right hemisphere 44.6
1787 Male, age 76, left hemisphere 40.8
1938 Female, age 85, left hemisphere 40.3
2613 Female, age 94, left hemisphere 39.5
2686 Male, age 75, right hemisphere 39.5
2117 Female, age 91, right hemisphere 38.2
Hippocampus, CA1
nTPM: 37.1
2749 Male, age 80, left hemisphere 42.5
2527 Male, age 74, both hemispheres 37.3
1873 Female, age 85, both hemispheres 36.8
2082 Female, age 91, right hemisphere 34.9
2045 Male, age 76, both hemispheres 33.8
Hippocampus, CA2
nTPM: 35.6
1963 Male, age 80, left hemisphere 40.7
2437 Female, age 94, left hemisphere 38.1
1892 Male, age 76, both hemispheres 37.2
2113 Female, age 91, right hemisphere 35.7
1940 Female, age 85, left hemisphere 32.0
2249 Male, age 74, both hemispheres 29.8
Hippocampus, CA3
nTPM: 36.0
2861 Female, age 67, both hemispheres 39.6
2137 Male, age 80, left hemisphere 39.5
2620 Female, age 94, left hemisphere 36.5
1867 Male, age 76, both hemispheres 36.3
1891 Female, age 85, both hemispheres 36.3
2436 Male, age 74, both hemispheres 28.1
Parahippocampal cortex
nTPM: 37.4
1850 Male, age 80, both hemispheres 43.1
2532 Female, age 72, left hemisphere 40.1
2692 Male, age 74, both hemispheres 38.3
1933 Female, age 85, both hemispheres 37.8
1990 Female, age 91, right hemisphere 37.8
2245 Female, age 91, both hemispheres 36.7
2622 Female, age 67, right hemisphere 35.9
2018 Male, age 76, both hemispheres 35.6
2693 Female, age 94, both hemispheres 35.4
2250 Female, age 67, right hemisphere 33.3
Perirhinal gyrus
nTPM: 42.8
1794 Male, age 80, right hemisphere 48.2
1847 Female, age 91, left hemisphere 43.9
2521 Female, age 94, right hemisphere 41.4
1841 Female, age 85, right hemisphere 41.0
2848 Male, age 76, right hemisphere 39.4
Subiculum
nTPM: 37.8
2438 Female, age 94, left hemisphere 40.9
1977 Female, age 85, both hemispheres 40.1
1901 Male, age 80, both hemispheres 37.7
2042 Male, age 76, both hemispheres 36.4
2619 Male, age 74, both hemispheres 36.3
2729 Female, age 91, right hemisphere 35.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.6
Samples: 197

Max nTPM: 26.8
Min nTPM: 8.5
Std nTPM: 2.6
Median nTPM: 13.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 26.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 26.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 20.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 20.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 19.6
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 18.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 18.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 18.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 18.4
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 18.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 18.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.8
FF:10153-102I9 76 years, female 40.2
FF:10169-103B7 60 years, female 37.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.3
Pig sample Sample description nTPM
Subiculum
nTPM: 18.2
Samples: 4

Max nTPM: 22.0
Min nTPM: 15.7
Sample A Female 22.0
Sample B Female 18.0
Sample C Male 17.0
Sample D Male 15.7
Dorsal hippocampus
nTPM: 19.4
Samples: 4

Max nTPM: 21.5
Min nTPM: 16.8
Sample A Female 21.5
Sample B Female 20.2
Sample C Male 18.9
Sample D Male 16.8
Entorhinal cortex
nTPM: 17.5
Samples: 4

Max nTPM: 18.5
Min nTPM: 16.1
Sample A Female 17.9
Sample B Female 17.6
Sample C Male 18.5
Sample D Male 16.1
Ventral hippocampus
nTPM: 18.0
Samples: 4

Max nTPM: 20.8
Min nTPM: 15.0
Sample A Female 17.2
Sample B Female 15.0
Sample C Male 20.8
Sample D Male 19.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.1
Samples: 4

Max nTPM: 22.2
Min nTPM: 20.4
Sample A Male 20.4
Sample B Male 20.7
Sample C Female 21.0
Sample D Female 22.2
Hippocampal formation
nTPM: 20.4
Samples: 4

Max nTPM: 22.5
Min nTPM: 18.5
Sample A Male 19.8
Sample B Male 20.9
Sample C Female 22.5
Sample D Female 18.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.5
69173226 Antisense, RP_050329_01_B11, Mouse strain C57BL/6J (56 days, male) 8.6
81600098 Antisense, RP_080110_03_D11, Mouse strain C57BL/6J (56 days, male) 8.4

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