HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:16.4 nTPM
HPA Brain:84.3 nTPM
GTEx:16.4 nTPM
FANTOM5:307.1 Scaled Tags Per Million
Pig:99.2 nTPM
Mouse:92.7 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB037085
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 84.3
Sample id Sample description nTPM
Hippocampus
nTPM: 62.9
1898 Male, age 80, left hemisphere 90.7
2621 Female, age 67, right hemisphere 67.0
1855 Male, age 76, left hemisphere 60.4
2148 Female, age 91, left hemisphere 55.3
1911 Female, age 85, right hemisphere 52.4
2529 Female, age 94, left hemisphere 51.8
Dentate gyrus
nTPM: 65.2
1927 Female, age 91, both hemispheres 80.8
2010 Male, age 76, both hemispheres 71.7
2246 Female, age 85, both hemispheres 63.7
2528 Male, age 74, both hemispheres 60.1
2530 Female, age 94, left hemisphere 58.2
2531 Female, age 67, both hemispheres 56.5
Entorhinal gyrus
nTPM: 67.1
1938 Female, age 85, left hemisphere 77.0
2613 Female, age 94, left hemisphere 76.5
2764 Male, age 80, right hemisphere 73.1
1787 Male, age 76, left hemisphere 68.3
2686 Male, age 75, right hemisphere 59.9
2117 Female, age 91, right hemisphere 47.8
Hippocampus, CA1
nTPM: 75.9
2749 Male, age 80, left hemisphere 125.5
1873 Female, age 85, both hemispheres 81.1
2527 Male, age 74, both hemispheres 69.3
2045 Male, age 76, both hemispheres 52.6
2082 Female, age 91, right hemisphere 51.3
Hippocampus, CA2
nTPM: 67.9
1892 Male, age 76, both hemispheres 101.3
1963 Male, age 80, left hemisphere 80.4
2249 Male, age 74, both hemispheres 64.0
2437 Female, age 94, left hemisphere 56.1
1940 Female, age 85, left hemisphere 52.8
2113 Female, age 91, right hemisphere 52.5
Hippocampus, CA3
nTPM: 67.0
2137 Male, age 80, left hemisphere 91.9
1867 Male, age 76, both hemispheres 76.3
2436 Male, age 74, both hemispheres 63.0
1891 Female, age 85, both hemispheres 59.6
2620 Female, age 94, left hemisphere 56.9
2861 Female, age 67, both hemispheres 54.4
Parahippocampal cortex
nTPM: 73.7
1850 Male, age 80, both hemispheres 92.1
2245 Female, age 91, both hemispheres 85.2
1933 Female, age 85, both hemispheres 77.9
2693 Female, age 94, both hemispheres 77.2
2250 Female, age 67, right hemisphere 76.9
1990 Female, age 91, right hemisphere 76.5
2532 Female, age 72, left hemisphere 73.5
2018 Male, age 76, both hemispheres 60.5
2692 Male, age 74, both hemispheres 59.1
2622 Female, age 67, right hemisphere 58.3
Perirhinal gyrus
nTPM: 84.3
1847 Female, age 91, left hemisphere 99.7
2521 Female, age 94, right hemisphere 86.8
1794 Male, age 80, right hemisphere 83.8
1841 Female, age 85, right hemisphere 78.7
2848 Male, age 76, right hemisphere 72.5
Subiculum
nTPM: 61.2
1901 Male, age 80, both hemispheres 76.0
1977 Female, age 85, both hemispheres 70.1
2438 Female, age 94, left hemisphere 70.1
2619 Male, age 74, both hemispheres 57.4
2042 Male, age 76, both hemispheres 49.4
2729 Female, age 91, right hemisphere 44.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.4
Samples: 197

Max nTPM: 38.5
Min nTPM: 5.6
Std nTPM: 6.2
Median nTPM: 14.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 38.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 33.0
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 32.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 32.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 31.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 30.4
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 30.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 30.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 29.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 29.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 29.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 307.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 307.1
FF:10169-103B7 60 years, female 422.7
FF:10153-102I9 76 years, female 191.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 99.2
Pig sample Sample description nTPM
Subiculum
nTPM: 82.4
Samples: 4

Max nTPM: 93.8
Min nTPM: 72.4
Sample A Female 93.8
Sample B Female 72.4
Sample C Male 75.6
Sample D Male 87.6
Dorsal hippocampus
nTPM: 99.2
Samples: 4

Max nTPM: 110.8
Min nTPM: 82.2
Sample A Female 110.8
Sample B Female 100.5
Sample C Male 103.3
Sample D Male 82.2
Entorhinal cortex
nTPM: 83.8
Samples: 4

Max nTPM: 91.0
Min nTPM: 74.2
Sample A Female 82.3
Sample B Female 91.0
Sample C Male 74.2
Sample D Male 87.6
Ventral hippocampus
nTPM: 81.7
Samples: 4

Max nTPM: 99.4
Min nTPM: 60.9
Sample A Female 99.4
Sample B Female 70.0
Sample C Male 60.9
Sample D Male 96.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 92.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 92.7
Samples: 4

Max nTPM: 114.2
Min nTPM: 82.2
Sample A Male 82.2
Sample B Male 90.4
Sample C Female 84.1
Sample D Female 114.2
Hippocampal formation
nTPM: 83.3
Samples: 4

Max nTPM: 93.5
Min nTPM: 74.2
Sample A Male 74.2
Sample B Male 93.5
Sample C Female 89.3
Sample D Female 76.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
71529995 Antisense, RP_050915_01_E04, Mouse strain C57BL/6J (56 days, male) 1.2

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