HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:34.9 nTPM
HPA Brain:59.3 nTPM
GTEx:34.9 nTPM
FANTOM5:35.4 Scaled Tags Per Million
Pig:32.8 nTPM
Mouse:31.2 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017432
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.3
Sample id Sample description nTPM
Hippocampus
nTPM: 58.0
1855 Male, age 76, left hemisphere 65.9
2621 Female, age 67, right hemisphere 61.9
2529 Female, age 94, left hemisphere 58.3
1898 Male, age 80, left hemisphere 56.5
2148 Female, age 91, left hemisphere 54.0
1911 Female, age 85, right hemisphere 51.3
Dentate gyrus
nTPM: 57.3
2010 Male, age 76, both hemispheres 80.6
2530 Female, age 94, left hemisphere 64.5
2531 Female, age 67, both hemispheres 55.2
1927 Female, age 91, both hemispheres 49.5
2246 Female, age 85, both hemispheres 47.3
2528 Male, age 74, both hemispheres 47.0
Entorhinal gyrus
nTPM: 55.8
1787 Male, age 76, left hemisphere 66.2
2117 Female, age 91, right hemisphere 58.5
2613 Female, age 94, left hemisphere 57.2
2686 Male, age 75, right hemisphere 53.9
2764 Male, age 80, right hemisphere 52.7
1938 Female, age 85, left hemisphere 46.1
Hippocampus, CA1
nTPM: 53.4
2045 Male, age 76, both hemispheres 68.8
2082 Female, age 91, right hemisphere 62.1
1873 Female, age 85, both hemispheres 47.2
2527 Male, age 74, both hemispheres 47.2
2749 Male, age 80, left hemisphere 41.8
Hippocampus, CA2
nTPM: 56.9
2437 Female, age 94, left hemisphere 64.2
1892 Male, age 76, both hemispheres 62.4
1940 Female, age 85, left hemisphere 60.9
2113 Female, age 91, right hemisphere 54.1
1963 Male, age 80, left hemisphere 53.2
2249 Male, age 74, both hemispheres 46.7
Hippocampus, CA3
nTPM: 59.3
2861 Female, age 67, both hemispheres 80.7
1867 Male, age 76, both hemispheres 71.2
2436 Male, age 74, both hemispheres 62.0
2620 Female, age 94, left hemisphere 49.5
2137 Male, age 80, left hemisphere 46.4
1891 Female, age 85, both hemispheres 46.0
Parahippocampal cortex
nTPM: 52.7
2018 Male, age 76, both hemispheres 87.9
2622 Female, age 67, right hemisphere 58.6
2245 Female, age 91, both hemispheres 53.7
2532 Female, age 72, left hemisphere 52.0
2250 Female, age 67, right hemisphere 48.7
1990 Female, age 91, right hemisphere 48.5
2692 Male, age 74, both hemispheres 46.3
1850 Male, age 80, both hemispheres 45.8
1933 Female, age 85, both hemispheres 43.4
2693 Female, age 94, both hemispheres 42.6
Perirhinal gyrus
nTPM: 45.3
2521 Female, age 94, right hemisphere 48.7
1794 Male, age 80, right hemisphere 46.6
2848 Male, age 76, right hemisphere 44.2
1841 Female, age 85, right hemisphere 43.5
1847 Female, age 91, left hemisphere 43.4
Subiculum
nTPM: 57.9
2042 Male, age 76, both hemispheres 89.9
2729 Female, age 91, right hemisphere 60.7
2438 Female, age 94, left hemisphere 53.0
2619 Male, age 74, both hemispheres 50.6
1901 Male, age 80, both hemispheres 48.2
1977 Female, age 85, both hemispheres 44.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.9
Samples: 197

Max nTPM: 129.4
Min nTPM: 20.2
Std nTPM: 12.0
Median nTPM: 31.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 129.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 101.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 72.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 67.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 65.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 64.9
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 62.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 57.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 54.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 53.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 52.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.4
FF:10153-102I9 76 years, female 52.2
FF:10169-103B7 60 years, female 18.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.8
Pig sample Sample description nTPM
Subiculum
nTPM: 30.7
Samples: 4

Max nTPM: 35.2
Min nTPM: 27.4
Sample A Female 35.2
Sample B Female 28.9
Sample C Male 31.2
Sample D Male 27.4
Dorsal hippocampus
nTPM: 32.9
Samples: 4

Max nTPM: 38.5
Min nTPM: 22.6
Sample A Female 38.5
Sample B Female 34.6
Sample C Male 35.8
Sample D Male 22.6
Entorhinal cortex
nTPM: 30.2
Samples: 4

Max nTPM: 35.2
Min nTPM: 26.6
Sample A Female 28.2
Sample B Female 30.9
Sample C Male 35.2
Sample D Male 26.6
Ventral hippocampus
nTPM: 31.6
Samples: 4

Max nTPM: 38.3
Min nTPM: 23.9
Sample A Female 29.7
Sample B Female 23.9
Sample C Male 38.3
Sample D Male 34.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.2
Samples: 4

Max nTPM: 33.3
Min nTPM: 28.8
Sample A Male 30.9
Sample B Male 31.8
Sample C Female 28.8
Sample D Female 33.3
Hippocampal formation
nTPM: 27.4
Samples: 4

Max nTPM: 29.3
Min nTPM: 24.8
Sample A Male 24.8
Sample B Male 28.1
Sample C Female 27.5
Sample D Female 29.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68300968 Antisense, RP_041129_02_E06, Mouse strain C57BL/6J (56 days, male) 0.4

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