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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
59.7
nTPM
Monaco:
164.2
nTPM
Schmiedel:
317.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
59.7
HPA sample
nTPM
gdT-cell nTPM: 55.4
Samples: 6
Max nTPM: 69.1
Min nTPM: 47.6
P10809_1007
48.2
P10809_1022
62.5
P10809_1041
69.1
P10809_1060
47.7
P10809_1077
57.1
P10809_1098
47.6
MAIT T-cell nTPM: 59.7
Samples: 6
Max nTPM: 76.4
Min nTPM: 47.0
P10809_1006
60.0
P10809_1024
76.4
P10809_1043
65.0
P10809_1062
55.9
P10809_1083
53.8
P10809_1097
47.0
Memory CD4 T-cell nTPM: 44.4
Samples: 6
Max nTPM: 58.4
Min nTPM: 33.4
P10809_1014
41.1
P10809_1026
33.4
P10809_1045
44.9
P10809_1064
42.9
P10809_1086
58.4
P10809_1113
45.7
Memory CD8 T-cell nTPM: 54.4
Samples: 5
Max nTPM: 58.8
Min nTPM: 46.3
P10809_1012
46.3
P10809_1027
56.0
P10809_1046
58.8
P10809_1065
56.5
P10809_1111
54.5
Naive CD4 T-cell nTPM: 41.6
Samples: 6
Max nTPM: 50.3
Min nTPM: 35.3
P10809_1015
35.3
P10809_1030
38.9
P10809_1049
38.7
P10809_1068
44.2
P10809_1085
50.3
P10809_1112
41.9
Naive CD8 T-cell nTPM: 47.7
Samples: 6
Max nTPM: 58.5
Min nTPM: 32.2
P10809_1016
32.2
P10809_1031
47.3
P10809_1050
49.7
P10809_1069
58.5
P10809_1087
57.1
P10809_1110
41.6
T-reg nTPM: 59.6
Samples: 6
Max nTPM: 92.8
Min nTPM: 46.5
P10809_1018
46.5
P10809_1037
92.8
P10809_1056
55.4
P10809_1075
48.2
P10809_1094
63.4
P10809_1106
51.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
164.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 118.6
Samples: 4
Max nTPM: 133.8
Min nTPM: 108.2
RHH5202_R3573
133.8
RHH5230_R3602
120.0
RHH5259_R3631
112.2
RHH5288_R3660
108.2
Effector memory CD8 T-cell nTPM: 164.2
Samples: 4
Max nTPM: 167.3
Min nTPM: 157.3
RHH5203_R3574
166.6
RHH5231_R3603
157.3
RHH5260_R3632
165.5
RHH5289_R3661
167.3
MAIT T-cell nTPM: 145.7
Samples: 4
Max nTPM: 196.5
Min nTPM: 109.8
RHH5233_R3605
164.6
RHH5205_R3576
196.5
RHH5262_R3634
112.0
RHH5297_R3663
109.8
Memory CD4 T-cell TFH nTPM: 104.0
Samples: 4
Max nTPM: 123.4
Min nTPM: 87.2
RHH5300_R3666
87.2
RHH5236_R3608
106.1
RHH5265_R3637
99.1
RHH5208_R3579
123.4
Memory CD4 T-cell Th1 nTPM: 110.3
Samples: 4
Max nTPM: 121.9
Min nTPM: 99.3
RHH5210_R3581
101.7
RHH5302_R3668
99.3
RHH5238_R3610
118.4
RHH5267_R3639
121.9
Memory CD4 T-cell Th1/Th17 nTPM: 133.4
Samples: 4
Max nTPM: 149.6
Min nTPM: 120.0
RHH5303_R3669
122.6
RHH5211_R3582
149.6
RHH5239_R3611
141.4
RHH5268_R3640
120.0
Memory CD4 T-cell Th17 nTPM: 143.7
Samples: 4
Max nTPM: 183.5
Min nTPM: 118.0
RHH5304_R3670
132.0
RHH5212_R3583
118.0
RHH5240_R3612
183.5
RHH5269_R3641
141.2
Memory CD4 T-cell Th2 nTPM: 126.4
Samples: 4
Max nTPM: 149.9
Min nTPM: 105.6
RHH5305_R3671
105.6
RHH5213_R3584
149.9
RHH5241_R3613
113.5
RHH5270_R3642
136.6
Naive CD4 T-cell nTPM: 91.2
Samples: 4
Max nTPM: 101.2
Min nTPM: 83.1
RHH5306_R3672
83.1
RHH5214_R3585
90.5
RHH5242_R3614
89.8
RHH5271_R3643
101.2
Naive CD8 T-cell nTPM: 104.9
Samples: 4
Max nTPM: 114.0
Min nTPM: 94.6
RHH5201_R3572
101.4
RHH5229_R3601
114.0
RHH5258_R3630
109.7
RHH5287_R3659
94.6
Non-Vd2 gdTCR nTPM: 152.9
Samples: 4
Max nTPM: 174.1
Min nTPM: 125.0
RHH5235_R3607
162.1
RHH5264_R3636
150.3
RHH5207_R3578
174.1
RHH5299_R3665
125.0
T-reg nTPM: 100.5
Samples: 4
Max nTPM: 111.2
Min nTPM: 80.7
RHH5301_R3667
80.7
RHH5237_R3609
111.2
RHH5266_R3638
106.9
RHH5209_R3580
103.2
Terminal effector memory CD4 T-cell nTPM: 152.0
Samples: 2
Max nTPM: 189.3
Min nTPM: 114.6
RHH5243_R3615
189.3
RHH5272_R3644
114.6
Terminal effector memory CD8 T-cell nTPM: 147.7
Samples: 4
Max nTPM: 177.5
Min nTPM: 114.4
RHH5232_R3604
177.5
RHH5204_R3575
114.4
RHH5261_R3633
169.2
RHH5296_R3662
129.7
Vd2 gdTCR nTPM: 139.1
Samples: 4
Max nTPM: 155.1
Min nTPM: 108.1
RHH5234_R3606
142.1
RHH5206_R3577
151.1
RHH5263_R3635
155.1
RHH5298_R3664
108.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
