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RPL27
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  • RPL27
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

RPL27
Synonyms L27
Gene descriptioni

Full gene name according to HGNC.

Ribosomal protein L27
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
Disease related genes
Human disease related genes
Ribosomal proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 17
Cytoband q21.31
Chromosome location (bp) 42998273 - 43002959
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000131469 (version 109)
Entrez gene 6155
HGNC HGNC:10328
UniProt P61353 (UniProt - Evidence at protein level)
neXtProt NX_P61353
GeneCards RPL27
Antibodypedia RPL27 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Component of the large ribosomal subunit 1, 2, 3, 4, 5. Required for proper rRNA processing and maturation of 28S and 5.8S rRNAs 6.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Ribonucleoprotein, Ribosomal protein
Gene summary (Entrez)i

Useful information about the gene from Entrez

Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of four RNA species and approximately 80 structurally distinct proteins. This gene encodes a member of the L27e family of ribosomal proteins and a component of the 60S subunit. A splice site mutation in this gene has been identified in a Diamond-Blackfan anemia (DBA) patient. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Mar 2017]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
RPL27-201
ENSP00000253788
ENST00000253788
P61353
[Direct mapping] 60S ribosomal protein L27
Show all
A0A024R1V4
[Target identity:100%; Query identity:100%] 60S ribosomal protein L27
Show all
Ribosomal proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   Candidate cancer biomarkers
Disease related genes
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
   Other congenital disorders
   Ribosomopathies
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002181 [cytoplasmic translation]
GO:0003723 [RNA binding]
GO:0003735 [structural constituent of ribosome]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005791 [rough endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0005840 [ribosome]
GO:0005925 [focal adhesion]
GO:0006364 [rRNA processing]
GO:0006412 [translation]
GO:0010467 [gene expression]
GO:0016020 [membrane]
GO:0022625 [cytosolic large ribosomal subunit]
GO:0022626 [cytosolic ribosome]
GO:0045202 [synapse]
GO:0070062 [extracellular exosome]
GO:0098556 [cytoplasmic side of rough endoplasmic reticulum membrane]
GO:1904044 [response to aldosterone]
GO:1990904 [ribonucleoprotein complex]
Show all
136 aa
15.8 kDa
No 0
RPL27-202
ENSP00000466019
ENST00000586277
K7ELC7
[Direct mapping] 60S ribosomal protein L27
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
   Other congenital disorders
   Ribosomopathies
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003735 [structural constituent of ribosome]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0005783 [endoplasmic reticulum]
GO:0005840 [ribosome]
GO:0006412 [translation]
GO:1990904 [ribonucleoprotein complex]
Show all
144 aa
16.4 kDa
No 0
RPL27-205
ENSP00000467587
ENST00000589037
P61353
[Direct mapping] 60S ribosomal protein L27
Show all
A0A024R1V4
[Target identity:100%; Query identity:100%] 60S ribosomal protein L27
Show all
Ribosomal proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   Candidate cancer biomarkers
Disease related genes
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
   Other congenital disorders
   Ribosomopathies
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002181 [cytoplasmic translation]
GO:0003723 [RNA binding]
GO:0003735 [structural constituent of ribosome]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005791 [rough endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0005840 [ribosome]
GO:0005925 [focal adhesion]
GO:0006364 [rRNA processing]
GO:0006412 [translation]
GO:0010467 [gene expression]
GO:0016020 [membrane]
GO:0022625 [cytosolic large ribosomal subunit]
GO:0022626 [cytosolic ribosome]
GO:0070062 [extracellular exosome]
GO:0098556 [cytoplasmic side of rough endoplasmic reticulum membrane]
GO:1990904 [ribonucleoprotein complex]
Show all
136 aa
15.8 kDa
No 0
RPL27-206
ENSP00000464813
ENST00000589913
P61353
[Direct mapping] 60S ribosomal protein L27
Show all
A0A024R1V4
[Target identity:100%; Query identity:100%] 60S ribosomal protein L27
Show all
Ribosomal proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   Candidate cancer biomarkers
Disease related genes
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
   Other congenital disorders
   Ribosomopathies
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002181 [cytoplasmic translation]
GO:0003723 [RNA binding]
GO:0003735 [structural constituent of ribosome]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005791 [rough endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0005840 [ribosome]
GO:0005925 [focal adhesion]
GO:0006364 [rRNA processing]
GO:0006412 [translation]
GO:0010467 [gene expression]
GO:0016020 [membrane]
GO:0022625 [cytosolic large ribosomal subunit]
GO:0022626 [cytosolic ribosome]
GO:0070062 [extracellular exosome]
GO:0098556 [cytoplasmic side of rough endoplasmic reticulum membrane]
GO:1990904 [ribonucleoprotein complex]
Show all
136 aa
15.8 kDa
No 0

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