HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:7.0 nTPM
HPA Brain:24.6 nTPM
GTEx:7.0 nTPM
FANTOM5:16.0 Scaled Tags Per Million
Pig:16.4 nTPM
Mouse:25.8 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004916
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.6
Sample id Sample description nTPM
Hippocampus
nTPM: 18.1
2621 Female, age 67, right hemisphere 23.6
2148 Female, age 91, left hemisphere 18.7
1898 Male, age 80, left hemisphere 18.3
1911 Female, age 85, right hemisphere 17.3
2529 Female, age 94, left hemisphere 16.4
1855 Male, age 76, left hemisphere 14.2
Dentate gyrus
nTPM: 18.8
2531 Female, age 67, both hemispheres 22.3
1927 Female, age 91, both hemispheres 19.8
2530 Female, age 94, left hemisphere 19.0
2246 Female, age 85, both hemispheres 18.2
2528 Male, age 74, both hemispheres 17.2
2010 Male, age 76, both hemispheres 16.2
Entorhinal gyrus
nTPM: 20.4
2613 Female, age 94, left hemisphere 28.8
1938 Female, age 85, left hemisphere 21.9
2686 Male, age 75, right hemisphere 19.9
2764 Male, age 80, right hemisphere 19.1
1787 Male, age 76, left hemisphere 17.5
2117 Female, age 91, right hemisphere 15.4
Hippocampus, CA1
nTPM: 18.9
2749 Male, age 80, left hemisphere 25.4
2527 Male, age 74, both hemispheres 19.1
2082 Female, age 91, right hemisphere 17.7
1873 Female, age 85, both hemispheres 16.2
2045 Male, age 76, both hemispheres 15.8
Hippocampus, CA2
nTPM: 18.8
2249 Male, age 74, both hemispheres 23.6
1940 Female, age 85, left hemisphere 20.6
1963 Male, age 80, left hemisphere 19.8
2113 Female, age 91, right hemisphere 16.8
1892 Male, age 76, both hemispheres 16.1
2437 Female, age 94, left hemisphere 16.1
Hippocampus, CA3
nTPM: 24.6
2436 Male, age 74, both hemispheres 35.8
2137 Male, age 80, left hemisphere 28.3
2861 Female, age 67, both hemispheres 27.5
2620 Female, age 94, left hemisphere 25.2
1867 Male, age 76, both hemispheres 15.5
1891 Female, age 85, both hemispheres 15.2
Parahippocampal cortex
nTPM: 19.9
2245 Female, age 91, both hemispheres 25.2
2693 Female, age 94, both hemispheres 22.5
2250 Female, age 67, right hemisphere 21.3
1933 Female, age 85, both hemispheres 20.5
2622 Female, age 67, right hemisphere 20.2
2532 Female, age 72, left hemisphere 19.7
1850 Male, age 80, both hemispheres 19.6
1990 Female, age 91, right hemisphere 18.0
2018 Male, age 76, both hemispheres 16.6
2692 Male, age 74, both hemispheres 15.3
Perirhinal gyrus
nTPM: 23.1
1847 Female, age 91, left hemisphere 25.3
1841 Female, age 85, right hemisphere 24.1
2521 Female, age 94, right hemisphere 23.7
1794 Male, age 80, right hemisphere 22.9
2848 Male, age 76, right hemisphere 19.4
Subiculum
nTPM: 16.9
2438 Female, age 94, left hemisphere 18.6
1901 Male, age 80, both hemispheres 17.9
2729 Female, age 91, right hemisphere 17.7
2619 Male, age 74, both hemispheres 16.9
1977 Female, age 85, both hemispheres 16.3
2042 Male, age 76, both hemispheres 14.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.0
Samples: 197

Max nTPM: 20.3
Min nTPM: 0.0
Std nTPM: 3.9
Median nTPM: 6.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 20.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 18.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 17.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 17.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 16.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 16.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 15.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 15.0
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 15.0
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 14.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 14.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.0
FF:10169-103B7 60 years, female 16.6
FF:10153-102I9 76 years, female 15.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.4
Pig sample Sample description nTPM
Subiculum
nTPM: 16.4
Samples: 4

Max nTPM: 18.6
Min nTPM: 15.3
Sample A Female 18.6
Sample B Female 15.3
Sample C Male 15.3
Sample D Male 16.3
Dorsal hippocampus
nTPM: 15.5
Samples: 4

Max nTPM: 17.3
Min nTPM: 13.4
Sample A Female 17.3
Sample B Female 17.3
Sample C Male 13.8
Sample D Male 13.4
Entorhinal cortex
nTPM: 15.3
Samples: 4

Max nTPM: 16.4
Min nTPM: 14.0
Sample A Female 15.7
Sample B Female 14.0
Sample C Male 16.4
Sample D Male 15.2
Ventral hippocampus
nTPM: 16.4
Samples: 4

Max nTPM: 22.4
Min nTPM: 12.6
Sample A Female 12.6
Sample B Female 12.7
Sample C Male 17.8
Sample D Male 22.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.5
Samples: 4

Max nTPM: 29.3
Min nTPM: 23.0
Sample A Male 24.3
Sample B Male 23.0
Sample C Female 25.4
Sample D Female 29.3
Hippocampal formation
nTPM: 25.9
Samples: 4

Max nTPM: 28.1
Min nTPM: 24.5
Sample A Male 26.2
Sample B Male 28.1
Sample C Female 24.6
Sample D Female 24.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
69626885 Antisense, RP_050428_01_E01, Mouse strain C57BL/6J (56 days, male) 0.5

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