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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
81.2
nTPM
Monaco:
219.4
nTPM
Schmiedel:
520.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
81.2
HPA sample
nTPM
gdT-cell nTPM: 23.0
Samples: 6
Max nTPM: 27.8
Min nTPM: 19.3
P10809_1007
19.5
P10809_1022
27.8
P10809_1041
23.1
P10809_1060
19.3
P10809_1077
22.8
P10809_1098
25.2
MAIT T-cell nTPM: 29.3
Samples: 6
Max nTPM: 39.9
Min nTPM: 24.0
P10809_1006
26.3
P10809_1024
33.9
P10809_1043
24.0
P10809_1062
25.2
P10809_1083
26.3
P10809_1097
39.9
Memory CD4 T-cell nTPM: 40.7
Samples: 6
Max nTPM: 48.1
Min nTPM: 36.2
P10809_1014
39.6
P10809_1026
36.9
P10809_1045
42.7
P10809_1064
36.2
P10809_1086
40.4
P10809_1113
48.1
Memory CD8 T-cell nTPM: 28.2
Samples: 5
Max nTPM: 34.0
Min nTPM: 24.5
P10809_1012
30.7
P10809_1027
25.2
P10809_1046
26.4
P10809_1065
24.5
P10809_1111
34.0
Naive CD4 T-cell nTPM: 81.2
Samples: 6
Max nTPM: 100.7
Min nTPM: 65.0
P10809_1015
75.6
P10809_1030
65.0
P10809_1049
86.6
P10809_1068
100.7
P10809_1085
74.4
P10809_1112
84.7
Naive CD8 T-cell nTPM: 64.1
Samples: 6
Max nTPM: 88.8
Min nTPM: 28.8
P10809_1016
71.7
P10809_1031
64.8
P10809_1050
63.9
P10809_1069
66.6
P10809_1087
28.8
P10809_1110
88.8
T-reg nTPM: 50.7
Samples: 6
Max nTPM: 56.1
Min nTPM: 45.5
P10809_1018
45.5
P10809_1037
52.3
P10809_1056
53.9
P10809_1075
56.1
P10809_1094
48.1
P10809_1106
48.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
219.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 99.7
Samples: 4
Max nTPM: 116.1
Min nTPM: 88.6
RHH5202_R3573
116.1
RHH5230_R3602
88.6
RHH5259_R3631
93.1
RHH5288_R3660
101.1
Effector memory CD8 T-cell nTPM: 66.6
Samples: 4
Max nTPM: 70.2
Min nTPM: 62.5
RHH5203_R3574
65.2
RHH5231_R3603
70.2
RHH5260_R3632
68.6
RHH5289_R3661
62.5
MAIT T-cell nTPM: 77.9
Samples: 4
Max nTPM: 85.6
Min nTPM: 71.0
RHH5233_R3605
71.0
RHH5205_R3576
85.6
RHH5262_R3634
82.3
RHH5297_R3663
72.7
Memory CD4 T-cell TFH nTPM: 120.2
Samples: 4
Max nTPM: 136.3
Min nTPM: 109.8
RHH5300_R3666
109.8
RHH5236_R3608
115.3
RHH5265_R3637
119.2
RHH5208_R3579
136.3
Memory CD4 T-cell Th1 nTPM: 114.4
Samples: 4
Max nTPM: 132.9
Min nTPM: 93.5
RHH5210_R3581
132.9
RHH5302_R3668
115.9
RHH5238_R3610
93.5
RHH5267_R3639
115.4
Memory CD4 T-cell Th1/Th17 nTPM: 103.7
Samples: 4
Max nTPM: 125.7
Min nTPM: 87.5
RHH5303_R3669
104.9
RHH5211_R3582
125.7
RHH5239_R3611
87.5
RHH5268_R3640
96.5
Memory CD4 T-cell Th17 nTPM: 119.9
Samples: 4
Max nTPM: 128.5
Min nTPM: 108.7
RHH5304_R3670
108.7
RHH5212_R3583
128.5
RHH5240_R3612
126.3
RHH5269_R3641
116.2
Memory CD4 T-cell Th2 nTPM: 127.3
Samples: 4
Max nTPM: 137.2
Min nTPM: 106.5
RHH5305_R3671
106.5
RHH5213_R3584
128.8
RHH5241_R3613
137.2
RHH5270_R3642
136.5
Naive CD4 T-cell nTPM: 181.8
Samples: 4
Max nTPM: 223.5
Min nTPM: 144.2
RHH5306_R3672
190.3
RHH5214_R3585
169.1
RHH5242_R3614
144.2
RHH5271_R3643
223.5
Naive CD8 T-cell nTPM: 219.5
Samples: 4
Max nTPM: 267.0
Min nTPM: 169.2
RHH5201_R3572
218.9
RHH5229_R3601
169.2
RHH5258_R3630
222.8
RHH5287_R3659
267.0
Non-Vd2 gdTCR nTPM: 70.8
Samples: 4
Max nTPM: 84.4
Min nTPM: 59.1
RHH5235_R3607
74.4
RHH5264_R3636
65.1
RHH5207_R3578
84.4
RHH5299_R3665
59.1
T-reg nTPM: 123.4
Samples: 4
Max nTPM: 126.6
Min nTPM: 116.5
RHH5301_R3667
116.5
RHH5237_R3609
126.4
RHH5266_R3638
124.0
RHH5209_R3580
126.6
Terminal effector memory CD4 T-cell nTPM: 93.5
Samples: 2
Max nTPM: 101.2
Min nTPM: 85.7
RHH5243_R3615
85.7
RHH5272_R3644
101.2
Terminal effector memory CD8 T-cell nTPM: 72.3
Samples: 4
Max nTPM: 79.1
Min nTPM: 61.6
RHH5232_R3604
73.7
RHH5204_R3575
61.6
RHH5261_R3633
79.1
RHH5296_R3662
74.7
Vd2 gdTCR nTPM: 80.3
Samples: 4
Max nTPM: 95.2
Min nTPM: 64.2
RHH5234_R3606
64.2
RHH5206_R3577
95.2
RHH5263_R3635
90.8
RHH5298_R3664
71.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
