HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:42.7 nTPM
HPA Brain:64.9 nTPM
GTEx:42.7 nTPM
FANTOM5:188.1 Scaled Tags Per Million
Pig:131.8 nTPM
Mouse:149.2 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003920
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.9
Sample id Sample description nTPM
Hippocampus
nTPM: 64.5
1855 Male, age 76, left hemisphere 72.2
1898 Male, age 80, left hemisphere 68.6
2621 Female, age 67, right hemisphere 65.4
2529 Female, age 94, left hemisphere 64.8
1911 Female, age 85, right hemisphere 58.5
2148 Female, age 91, left hemisphere 57.8
Dentate gyrus
nTPM: 64.1
2530 Female, age 94, left hemisphere 72.9
2010 Male, age 76, both hemispheres 68.9
2246 Female, age 85, both hemispheres 66.0
2531 Female, age 67, both hemispheres 60.0
2528 Male, age 74, both hemispheres 59.1
1927 Female, age 91, both hemispheres 57.7
Entorhinal gyrus
nTPM: 64.9
2764 Male, age 80, right hemisphere 72.8
1938 Female, age 85, left hemisphere 69.8
1787 Male, age 76, left hemisphere 63.4
2613 Female, age 94, left hemisphere 61.9
2686 Male, age 75, right hemisphere 61.8
2117 Female, age 91, right hemisphere 59.9
Hippocampus, CA1
nTPM: 63.2
2749 Male, age 80, left hemisphere 76.7
1873 Female, age 85, both hemispheres 66.2
2045 Male, age 76, both hemispheres 62.9
2527 Male, age 74, both hemispheres 60.1
2082 Female, age 91, right hemisphere 49.9
Hippocampus, CA2
nTPM: 59.3
1892 Male, age 76, both hemispheres 68.8
1963 Male, age 80, left hemisphere 64.4
2249 Male, age 74, both hemispheres 59.5
1940 Female, age 85, left hemisphere 58.0
2437 Female, age 94, left hemisphere 57.7
2113 Female, age 91, right hemisphere 47.5
Hippocampus, CA3
nTPM: 63.8
1867 Male, age 76, both hemispheres 68.6
2620 Female, age 94, left hemisphere 67.1
2137 Male, age 80, left hemisphere 65.4
2861 Female, age 67, both hemispheres 65.4
2436 Male, age 74, both hemispheres 58.4
1891 Female, age 85, both hemispheres 58.2
Parahippocampal cortex
nTPM: 59.9
2245 Female, age 91, both hemispheres 67.3
1850 Male, age 80, both hemispheres 65.8
2532 Female, age 72, left hemisphere 62.4
2692 Male, age 74, both hemispheres 61.3
1933 Female, age 85, both hemispheres 60.4
2018 Male, age 76, both hemispheres 58.8
2622 Female, age 67, right hemisphere 57.6
2693 Female, age 94, both hemispheres 56.1
1990 Female, age 91, right hemisphere 54.8
2250 Female, age 67, right hemisphere 54.6
Perirhinal gyrus
nTPM: 60.4
1794 Male, age 80, right hemisphere 67.2
1841 Female, age 85, right hemisphere 60.5
1847 Female, age 91, left hemisphere 59.7
2848 Male, age 76, right hemisphere 57.7
2521 Female, age 94, right hemisphere 57.0
Subiculum
nTPM: 60.9
2042 Male, age 76, both hemispheres 67.4
1901 Male, age 80, both hemispheres 63.5
1977 Female, age 85, both hemispheres 60.5
2438 Female, age 94, left hemisphere 59.0
2619 Male, age 74, both hemispheres 58.1
2729 Female, age 91, right hemisphere 56.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.7
Samples: 197

Max nTPM: 71.5
Min nTPM: 23.4
Std nTPM: 6.9
Median nTPM: 42.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 71.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 69.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 61.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 60.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 57.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 57.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 56.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 55.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 55.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 55.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 54.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 188.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 188.1
FF:10169-103B7 60 years, female 223.2
FF:10153-102I9 76 years, female 152.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 131.8
Pig sample Sample description nTPM
Subiculum
nTPM: 114.9
Samples: 4

Max nTPM: 142.3
Min nTPM: 101.7
Sample A Female 142.3
Sample B Female 101.7
Sample C Male 107.4
Sample D Male 108.0
Dorsal hippocampus
nTPM: 131.8
Samples: 4

Max nTPM: 161.2
Min nTPM: 109.0
Sample A Female 161.2
Sample B Female 123.3
Sample C Male 133.6
Sample D Male 109.0
Entorhinal cortex
nTPM: 118.9
Samples: 4

Max nTPM: 126.9
Min nTPM: 107.1
Sample A Female 126.9
Sample B Female 118.2
Sample C Male 123.4
Sample D Male 107.1
Ventral hippocampus
nTPM: 116.3
Samples: 4

Max nTPM: 132.2
Min nTPM: 90.9
Sample A Female 110.0
Sample B Female 90.9
Sample C Male 132.2
Sample D Male 132.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 149.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 145.8
Samples: 4

Max nTPM: 155.8
Min nTPM: 138.2
Sample A Male 143.0
Sample B Male 138.2
Sample C Female 155.8
Sample D Female 146.1
Hippocampal formation
nTPM: 149.2
Samples: 4

Max nTPM: 157.6
Min nTPM: 137.1
Sample A Male 157.6
Sample B Male 144.7
Sample C Female 157.2
Sample D Female 137.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
73573295 Antisense, RP_051121_03_F11, Mouse strain C57BL/6J (56 days, male) 0.0

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