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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
56.9
nTPM
Monaco:
147.0
nTPM
Schmiedel:
146.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
56.9
HPA sample
nTPM
gdT-cell nTPM: 32.6
Samples: 6
Max nTPM: 45.4
Min nTPM: 13.5
P10809_1007
45.4
P10809_1022
33.8
P10809_1041
29.2
P10809_1060
13.5
P10809_1077
37.5
P10809_1098
36.0
MAIT T-cell nTPM: 35.1
Samples: 6
Max nTPM: 47.9
Min nTPM: 21.1
P10809_1006
47.9
P10809_1024
21.8
P10809_1043
35.8
P10809_1062
21.1
P10809_1083
36.6
P10809_1097
47.1
Memory CD4 T-cell nTPM: 40.3
Samples: 6
Max nTPM: 59.1
Min nTPM: 21.1
P10809_1014
59.1
P10809_1026
49.3
P10809_1045
35.5
P10809_1064
42.0
P10809_1086
34.9
P10809_1113
21.1
Memory CD8 T-cell nTPM: 42.7
Samples: 5
Max nTPM: 52.2
Min nTPM: 36.2
P10809_1012
52.2
P10809_1027
39.4
P10809_1046
36.2
P10809_1065
41.2
P10809_1111
44.3
Naive CD4 T-cell nTPM: 52.9
Samples: 6
Max nTPM: 68.1
Min nTPM: 43.1
P10809_1015
62.9
P10809_1030
48.5
P10809_1049
43.1
P10809_1068
51.3
P10809_1085
68.1
P10809_1112
43.7
Naive CD8 T-cell nTPM: 46.8
Samples: 6
Max nTPM: 67.8
Min nTPM: 22.3
P10809_1016
67.8
P10809_1031
55.3
P10809_1050
39.5
P10809_1069
46.2
P10809_1087
22.3
P10809_1110
49.4
T-reg nTPM: 56.9
Samples: 6
Max nTPM: 66.5
Min nTPM: 30.2
P10809_1018
63.6
P10809_1037
66.5
P10809_1056
66.3
P10809_1075
51.0
P10809_1094
30.2
P10809_1106
63.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
147.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 105.7
Samples: 4
Max nTPM: 154.8
Min nTPM: 69.0
RHH5202_R3573
69.0
RHH5230_R3602
154.8
RHH5259_R3631
84.6
RHH5288_R3660
114.3
Effector memory CD8 T-cell nTPM: 101.6
Samples: 4
Max nTPM: 147.1
Min nTPM: 41.3
RHH5203_R3574
116.6
RHH5231_R3603
147.1
RHH5260_R3632
101.2
RHH5289_R3661
41.3
MAIT T-cell nTPM: 103.1
Samples: 4
Max nTPM: 141.8
Min nTPM: 69.8
RHH5233_R3605
69.8
RHH5205_R3576
117.1
RHH5262_R3634
141.8
RHH5297_R3663
83.5
Memory CD4 T-cell TFH nTPM: 115.1
Samples: 4
Max nTPM: 156.9
Min nTPM: 64.3
RHH5300_R3666
119.9
RHH5236_R3608
156.9
RHH5265_R3637
119.2
RHH5208_R3579
64.3
Memory CD4 T-cell Th1 nTPM: 112.4
Samples: 4
Max nTPM: 133.9
Min nTPM: 92.4
RHH5210_R3581
127.4
RHH5302_R3668
92.4
RHH5238_R3610
96.0
RHH5267_R3639
133.9
Memory CD4 T-cell Th1/Th17 nTPM: 113.1
Samples: 4
Max nTPM: 173.3
Min nTPM: 41.2
RHH5303_R3669
41.2
RHH5211_R3582
173.3
RHH5239_R3611
110.6
RHH5268_R3640
127.1
Memory CD4 T-cell Th17 nTPM: 109.8
Samples: 4
Max nTPM: 163.6
Min nTPM: 72.4
RHH5304_R3670
72.4
RHH5212_R3583
163.6
RHH5240_R3612
83.8
RHH5269_R3641
119.4
Memory CD4 T-cell Th2 nTPM: 123.7
Samples: 4
Max nTPM: 143.9
Min nTPM: 99.8
RHH5305_R3671
110.4
RHH5213_R3584
140.8
RHH5241_R3613
99.8
RHH5270_R3642
143.9
Naive CD4 T-cell nTPM: 142.4
Samples: 4
Max nTPM: 155.7
Min nTPM: 115.6
RHH5306_R3672
155.7
RHH5214_R3585
152.9
RHH5242_R3614
115.6
RHH5271_R3643
145.4
Naive CD8 T-cell nTPM: 122.0
Samples: 4
Max nTPM: 165.4
Min nTPM: 56.2
RHH5201_R3572
56.2
RHH5229_R3601
115.1
RHH5258_R3630
151.3
RHH5287_R3659
165.4
Non-Vd2 gdTCR nTPM: 93.4
Samples: 4
Max nTPM: 105.6
Min nTPM: 71.8
RHH5235_R3607
104.2
RHH5264_R3636
92.1
RHH5207_R3578
71.8
RHH5299_R3665
105.6
T-reg nTPM: 147.0
Samples: 4
Max nTPM: 155.2
Min nTPM: 134.2
RHH5301_R3667
144.5
RHH5237_R3609
154.1
RHH5266_R3638
155.2
RHH5209_R3580
134.2
Terminal effector memory CD4 T-cell nTPM: 108.2
Samples: 2
Max nTPM: 114.8
Min nTPM: 101.5
RHH5243_R3615
101.5
RHH5272_R3644
114.8
Terminal effector memory CD8 T-cell nTPM: 94.5
Samples: 4
Max nTPM: 112.1
Min nTPM: 62.2
RHH5232_R3604
95.3
RHH5204_R3575
112.1
RHH5261_R3633
108.5
RHH5296_R3662
62.2
Vd2 gdTCR nTPM: 100.8
Samples: 4
Max nTPM: 107.7
Min nTPM: 90.5
RHH5234_R3606
107.7
RHH5206_R3577
102.0
RHH5263_R3635
90.5
RHH5298_R3664
102.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
