HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:29.1 nTPM
HPA Brain:115.5 nTPM
GTEx:29.1 nTPM
FANTOM5:49.5 Scaled Tags Per Million
Pig:78.3 nTPM
Mouse:166.0 nTPM
Allen mouse:12.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000275Antibody HPA000500
Glial cells Not detectedMedium
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 115.5
Sample id Sample description nTPM
Hippocampus
nTPM: 84.5
1898 Male, age 80, left hemisphere 121.2
2621 Female, age 67, right hemisphere 112.6
1855 Male, age 76, left hemisphere 99.2
1911 Female, age 85, right hemisphere 70.4
2529 Female, age 94, left hemisphere 54.5
2148 Female, age 91, left hemisphere 49.4
Dentate gyrus
nTPM: 76.0
2530 Female, age 94, left hemisphere 121.8
2010 Male, age 76, both hemispheres 100.4
1927 Female, age 91, both hemispheres 77.9
2246 Female, age 85, both hemispheres 70.1
2528 Male, age 74, both hemispheres 46.9
2531 Female, age 67, both hemispheres 38.9
Entorhinal gyrus
nTPM: 100.3
2613 Female, age 94, left hemisphere 120.3
1938 Female, age 85, left hemisphere 120.1
2764 Male, age 80, right hemisphere 112.5
2686 Male, age 75, right hemisphere 98.5
1787 Male, age 76, left hemisphere 79.6
2117 Female, age 91, right hemisphere 70.9
Hippocampus, CA1
nTPM: 90.0
2749 Male, age 80, left hemisphere 182.1
1873 Female, age 85, both hemispheres 103.0
2527 Male, age 74, both hemispheres 74.0
2082 Female, age 91, right hemisphere 56.6
2045 Male, age 76, both hemispheres 34.4
Hippocampus, CA2
nTPM: 92.5
1963 Male, age 80, left hemisphere 149.8
1892 Male, age 76, both hemispheres 115.5
2437 Female, age 94, left hemisphere 104.6
2249 Male, age 74, both hemispheres 68.6
2113 Female, age 91, right hemisphere 62.7
1940 Female, age 85, left hemisphere 53.8
Hippocampus, CA3
nTPM: 69.9
2137 Male, age 80, left hemisphere 120.8
1867 Male, age 76, both hemispheres 87.7
2861 Female, age 67, both hemispheres 66.5
1891 Female, age 85, both hemispheres 65.8
2436 Male, age 74, both hemispheres 51.3
2620 Female, age 94, left hemisphere 27.6
Parahippocampal cortex
nTPM: 98.7
1850 Male, age 80, both hemispheres 132.8
2622 Female, age 67, right hemisphere 112.4
2532 Female, age 72, left hemisphere 109.4
1933 Female, age 85, both hemispheres 108.7
2693 Female, age 94, both hemispheres 108.3
2018 Male, age 76, both hemispheres 93.3
1990 Female, age 91, right hemisphere 90.7
2250 Female, age 67, right hemisphere 82.3
2245 Female, age 91, both hemispheres 80.7
2692 Male, age 74, both hemispheres 68.7
Perirhinal gyrus
nTPM: 115.5
1841 Female, age 85, right hemisphere 141.2
1794 Male, age 80, right hemisphere 118.3
1847 Female, age 91, left hemisphere 112.4
2521 Female, age 94, right hemisphere 104.0
2848 Male, age 76, right hemisphere 101.3
Subiculum
nTPM: 76.4
1977 Female, age 85, both hemispheres 102.5
1901 Male, age 80, both hemispheres 92.2
2042 Male, age 76, both hemispheres 80.2
2438 Female, age 94, left hemisphere 75.2
2619 Male, age 74, both hemispheres 66.6
2729 Female, age 91, right hemisphere 41.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.1
Samples: 197

Max nTPM: 68.1
Min nTPM: 12.4
Std nTPM: 11.5
Median nTPM: 25.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 68.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 64.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 63.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 62.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 59.0
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 55.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 53.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 53.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 53.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 52.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 51.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.5
FF:10153-102I9 76 years, female 51.2
FF:10169-103B7 60 years, female 47.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 78.3
Pig sample Sample description nTPM
Subiculum
nTPM: 64.6
Samples: 4

Max nTPM: 89.7
Min nTPM: 50.9
Sample A Female 89.7
Sample B Female 60.5
Sample C Male 57.4
Sample D Male 50.9
Dorsal hippocampus
nTPM: 78.3
Samples: 4

Max nTPM: 93.0
Min nTPM: 61.6
Sample A Female 93.0
Sample B Female 78.4
Sample C Male 80.0
Sample D Male 61.6
Entorhinal cortex
nTPM: 78.2
Samples: 4

Max nTPM: 84.0
Min nTPM: 70.4
Sample A Female 70.4
Sample B Female 84.0
Sample C Male 78.4
Sample D Male 79.8
Ventral hippocampus
nTPM: 76.1
Samples: 4

Max nTPM: 93.1
Min nTPM: 56.4
Sample A Female 72.9
Sample B Female 56.4
Sample C Male 81.9
Sample D Male 93.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 166.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 165.7
Samples: 4

Max nTPM: 178.8
Min nTPM: 158.8
Sample A Male 159.8
Sample B Male 178.8
Sample C Female 165.4
Sample D Female 158.8
Hippocampal formation
nTPM: 166.0
Samples: 4

Max nTPM: 176.1
Min nTPM: 151.8
Sample A Male 166.1
Sample B Male 176.1
Sample C Female 170.1
Sample D Female 151.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.4
73769321 Antisense, RP_051121_04_B06, Mouse strain C57BL/6J (56 days, male) 14.1
69837912 Antisense, RP_050222_02_F11, Mouse strain C57BL/6J (56 days, male) 10.8

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