We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
101.1
nTPM
Monaco:
94.0
nTPM
Schmiedel:
61.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
101.1
HPA sample
nTPM
gdT-cell nTPM: 94.4
Samples: 6
Max nTPM: 133.3
Min nTPM: 60.0
P10809_1007
60.0
P10809_1022
107.7
P10809_1041
133.3
P10809_1060
76.3
P10809_1077
86.7
P10809_1098
102.2
MAIT T-cell nTPM: 91.3
Samples: 6
Max nTPM: 121.1
Min nTPM: 53.5
P10809_1006
53.5
P10809_1024
95.7
P10809_1043
93.4
P10809_1062
91.4
P10809_1083
92.4
P10809_1097
121.1
Memory CD4 T-cell nTPM: 71.6
Samples: 6
Max nTPM: 92.3
Min nTPM: 39.0
P10809_1014
39.0
P10809_1026
75.1
P10809_1045
87.8
P10809_1064
73.3
P10809_1086
92.3
P10809_1113
61.9
Memory CD8 T-cell nTPM: 101.1
Samples: 5
Max nTPM: 118.0
Min nTPM: 65.8
P10809_1012
65.8
P10809_1027
118.0
P10809_1046
111.4
P10809_1065
104.2
P10809_1111
106.0
Naive CD4 T-cell nTPM: 53.9
Samples: 6
Max nTPM: 75.6
Min nTPM: 29.4
P10809_1015
29.4
P10809_1030
49.8
P10809_1049
73.1
P10809_1068
46.9
P10809_1085
75.6
P10809_1112
48.6
Naive CD8 T-cell nTPM: 79.8
Samples: 6
Max nTPM: 129.1
Min nTPM: 29.8
P10809_1016
29.8
P10809_1031
129.1
P10809_1050
84.9
P10809_1069
73.1
P10809_1087
107.5
P10809_1110
54.5
T-reg nTPM: 71.6
Samples: 6
Max nTPM: 82.2
Min nTPM: 47.9
P10809_1018
47.9
P10809_1037
82.2
P10809_1056
80.9
P10809_1075
70.4
P10809_1094
73.5
P10809_1106
74.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
94.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 49.9
Samples: 4
Max nTPM: 65.5
Min nTPM: 36.0
RHH5202_R3573
36.0
RHH5230_R3602
47.3
RHH5259_R3631
50.7
RHH5288_R3660
65.5
Effector memory CD8 T-cell nTPM: 84.8
Samples: 4
Max nTPM: 95.6
Min nTPM: 72.6
RHH5203_R3574
88.1
RHH5231_R3603
95.6
RHH5260_R3632
72.6
RHH5289_R3661
82.9
MAIT T-cell nTPM: 83.3
Samples: 4
Max nTPM: 90.7
Min nTPM: 69.3
RHH5233_R3605
85.7
RHH5205_R3576
69.3
RHH5262_R3634
90.7
RHH5297_R3663
87.6
Memory CD4 T-cell TFH nTPM: 61.7
Samples: 4
Max nTPM: 71.1
Min nTPM: 52.3
RHH5300_R3666
54.6
RHH5236_R3608
71.1
RHH5265_R3637
52.3
RHH5208_R3579
68.6
Memory CD4 T-cell Th1 nTPM: 46.6
Samples: 4
Max nTPM: 65.3
Min nTPM: 28.9
RHH5210_R3581
42.1
RHH5302_R3668
65.3
RHH5238_R3610
28.9
RHH5267_R3639
50.0
Memory CD4 T-cell Th1/Th17 nTPM: 71.1
Samples: 4
Max nTPM: 91.7
Min nTPM: 48.2
RHH5303_R3669
85.0
RHH5211_R3582
91.7
RHH5239_R3611
48.2
RHH5268_R3640
59.3
Memory CD4 T-cell Th17 nTPM: 46.0
Samples: 4
Max nTPM: 61.7
Min nTPM: 30.8
RHH5304_R3670
50.0
RHH5212_R3583
61.7
RHH5240_R3612
30.8
RHH5269_R3641
41.3
Memory CD4 T-cell Th2 nTPM: 74.2
Samples: 4
Max nTPM: 93.9
Min nTPM: 59.0
RHH5305_R3671
69.9
RHH5213_R3584
93.9
RHH5241_R3613
59.0
RHH5270_R3642
74.1
Naive CD4 T-cell nTPM: 43.1
Samples: 4
Max nTPM: 52.8
Min nTPM: 34.2
RHH5306_R3672
50.2
RHH5214_R3585
52.8
RHH5242_R3614
34.2
RHH5271_R3643
35.2
Naive CD8 T-cell nTPM: 30.8
Samples: 4
Max nTPM: 46.8
Min nTPM: 19.3
RHH5201_R3572
30.0
RHH5229_R3601
19.3
RHH5258_R3630
46.8
RHH5287_R3659
27.2
Non-Vd2 gdTCR nTPM: 94.0
Samples: 4
Max nTPM: 135.9
Min nTPM: 66.8
RHH5235_R3607
66.8
RHH5264_R3636
135.9
RHH5207_R3578
91.2
RHH5299_R3665
82.1
T-reg nTPM: 54.9
Samples: 4
Max nTPM: 72.6
Min nTPM: 41.0
RHH5301_R3667
58.9
RHH5237_R3609
72.6
RHH5266_R3638
41.0
RHH5209_R3580
47.0
Terminal effector memory CD4 T-cell nTPM: 85.3
Samples: 2
Max nTPM: 115.6
Min nTPM: 55.0
RHH5243_R3615
55.0
RHH5272_R3644
115.6
Terminal effector memory CD8 T-cell nTPM: 92.2
Samples: 4
Max nTPM: 99.3
Min nTPM: 84.0
RHH5232_R3604
99.3
RHH5204_R3575
87.6
RHH5261_R3633
84.0
RHH5296_R3662
98.0
Vd2 gdTCR nTPM: 87.3
Samples: 4
Max nTPM: 129.4
Min nTPM: 63.5
RHH5234_R3606
63.5
RHH5206_R3577
129.4
RHH5263_R3635
67.8
RHH5298_R3664
88.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
