HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:16.5 nTPM
HPA Brain:15.7 nTPM
GTEx:16.5 nTPM
FANTOM5:18.5 Scaled Tags Per Million
Pig:16.4 nTPM
Mouse:21.0 nTPM
Allen mouse:16.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045622Antibody HPA048499
Glial cells LowNot detected
Neuronal cells HighMedium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.7
Sample id Sample description nTPM
Hippocampus
nTPM: 14.1
1898 Male, age 80, left hemisphere 15.9
1855 Male, age 76, left hemisphere 15.0
2621 Female, age 67, right hemisphere 14.9
1911 Female, age 85, right hemisphere 13.6
2529 Female, age 94, left hemisphere 13.6
2148 Female, age 91, left hemisphere 11.4
Dentate gyrus
nTPM: 13.7
2010 Male, age 76, both hemispheres 18.2
2246 Female, age 85, both hemispheres 15.3
1927 Female, age 91, both hemispheres 15.1
2531 Female, age 67, both hemispheres 12.2
2530 Female, age 94, left hemisphere 10.8
2528 Male, age 74, both hemispheres 10.4
Entorhinal gyrus
nTPM: 12.8
2613 Female, age 94, left hemisphere 14.5
1787 Male, age 76, left hemisphere 13.8
1938 Female, age 85, left hemisphere 13.3
2686 Male, age 75, right hemisphere 11.8
2117 Female, age 91, right hemisphere 11.7
2764 Male, age 80, right hemisphere 11.6
Hippocampus, CA1
nTPM: 15.7
2749 Male, age 80, left hemisphere 23.2
1873 Female, age 85, both hemispheres 17.6
2527 Male, age 74, both hemispheres 13.6
2045 Male, age 76, both hemispheres 13.2
2082 Female, age 91, right hemisphere 10.9
Hippocampus, CA2
nTPM: 14.0
1892 Male, age 76, both hemispheres 18.7
1963 Male, age 80, left hemisphere 16.2
1940 Female, age 85, left hemisphere 13.4
2249 Male, age 74, both hemispheres 12.8
2113 Female, age 91, right hemisphere 12.2
2437 Female, age 94, left hemisphere 11.0
Hippocampus, CA3
nTPM: 14.9
2137 Male, age 80, left hemisphere 22.0
2436 Male, age 74, both hemispheres 17.5
1867 Male, age 76, both hemispheres 17.2
1891 Female, age 85, both hemispheres 12.8
2620 Female, age 94, left hemisphere 10.4
2861 Female, age 67, both hemispheres 9.3
Parahippocampal cortex
nTPM: 13.1
1933 Female, age 85, both hemispheres 16.9
2018 Male, age 76, both hemispheres 15.7
1850 Male, age 80, both hemispheres 15.2
2250 Female, age 67, right hemisphere 14.6
2245 Female, age 91, both hemispheres 14.1
1990 Female, age 91, right hemisphere 12.9
2693 Female, age 94, both hemispheres 11.8
2532 Female, age 72, left hemisphere 11.2
2692 Male, age 74, both hemispheres 10.4
2622 Female, age 67, right hemisphere 8.5
Perirhinal gyrus
nTPM: 14.8
2521 Female, age 94, right hemisphere 17.9
1847 Female, age 91, left hemisphere 15.7
1841 Female, age 85, right hemisphere 14.9
1794 Male, age 80, right hemisphere 13.0
2848 Male, age 76, right hemisphere 12.2
Subiculum
nTPM: 14.0
2042 Male, age 76, both hemispheres 16.9
1901 Male, age 80, both hemispheres 16.4
2438 Female, age 94, left hemisphere 15.6
1977 Female, age 85, both hemispheres 14.1
2619 Male, age 74, both hemispheres 10.8
2729 Female, age 91, right hemisphere 10.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.5
Samples: 197

Max nTPM: 68.5
Min nTPM: 4.3
Std nTPM: 7.3
Median nTPM: 14.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 68.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 40.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 37.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 35.2
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 34.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 32.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 31.7
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 30.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 30.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 29.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 29.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.5
FF:10169-103B7 60 years, female 29.0
FF:10153-102I9 76 years, female 7.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.4
Pig sample Sample description nTPM
Subiculum
nTPM: 14.9
Samples: 4

Max nTPM: 17.4
Min nTPM: 12.8
Sample A Female 17.4
Sample B Female 16.1
Sample C Male 13.2
Sample D Male 12.8
Dorsal hippocampus
nTPM: 16.4
Samples: 4

Max nTPM: 20.0
Min nTPM: 13.9
Sample A Female 20.0
Sample B Female 13.9
Sample C Male 16.0
Sample D Male 15.8
Entorhinal cortex
nTPM: 13.5
Samples: 4

Max nTPM: 17.1
Min nTPM: 11.2
Sample A Female 13.9
Sample B Female 17.1
Sample C Male 11.9
Sample D Male 11.2
Ventral hippocampus
nTPM: 13.1
Samples: 4

Max nTPM: 13.9
Min nTPM: 12.4
Sample A Female 13.6
Sample B Female 12.4
Sample C Male 12.6
Sample D Male 13.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.6
Samples: 4

Max nTPM: 19.1
Min nTPM: 15.4
Sample A Male 15.4
Sample B Male 17.1
Sample C Female 18.6
Sample D Female 19.1
Hippocampal formation
nTPM: 21.0
Samples: 4

Max nTPM: 22.8
Min nTPM: 18.8
Sample A Male 22.1
Sample B Male 22.8
Sample C Female 18.8
Sample D Female 20.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.3
512761 Antisense, RP_040809_02_C11, Mouse strain C57BL/6J (56 days, male) 16.3

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