HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:10.3 nTPM
HPA Brain:12.5 nTPM
GTEx:10.3 nTPM
FANTOM5:14.0 Scaled Tags Per Million
Pig:12.0 nTPM
Mouse:13.4 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.5
Sample id Sample description nTPM
Hippocampus
nTPM: 9.2
1855 Male, age 76, left hemisphere 13.9
2621 Female, age 67, right hemisphere 11.6
1898 Male, age 80, left hemisphere 10.5
2148 Female, age 91, left hemisphere 8.4
1911 Female, age 85, right hemisphere 7.6
2529 Female, age 94, left hemisphere 3.2
Dentate gyrus
nTPM: 12.5
2530 Female, age 94, left hemisphere 19.6
2010 Male, age 76, both hemispheres 12.7
2528 Male, age 74, both hemispheres 12.2
2531 Female, age 67, both hemispheres 11.0
2246 Female, age 85, both hemispheres 10.0
1927 Female, age 91, both hemispheres 9.3
Entorhinal gyrus
nTPM: 12.2
2613 Female, age 94, left hemisphere 17.8
1787 Male, age 76, left hemisphere 14.1
2686 Male, age 75, right hemisphere 11.3
2117 Female, age 91, right hemisphere 10.9
2764 Male, age 80, right hemisphere 9.8
1938 Female, age 85, left hemisphere 9.3
Hippocampus, CA1
nTPM: 9.9
2082 Female, age 91, right hemisphere 12.4
1873 Female, age 85, both hemispheres 11.9
2749 Male, age 80, left hemisphere 9.9
2527 Male, age 74, both hemispheres 7.7
2045 Male, age 76, both hemispheres 7.6
Hippocampus, CA2
nTPM: 11.7
2437 Female, age 94, left hemisphere 16.6
2113 Female, age 91, right hemisphere 12.3
1963 Male, age 80, left hemisphere 11.3
1892 Male, age 76, both hemispheres 11.1
2249 Male, age 74, both hemispheres 10.2
1940 Female, age 85, left hemisphere 8.8
Hippocampus, CA3
nTPM: 12.5
2620 Female, age 94, left hemisphere 17.0
2861 Female, age 67, both hemispheres 14.7
1867 Male, age 76, both hemispheres 12.6
2137 Male, age 80, left hemisphere 10.8
2436 Male, age 74, both hemispheres 10.2
1891 Female, age 85, both hemispheres 9.5
Parahippocampal cortex
nTPM: 11.6
2693 Female, age 94, both hemispheres 17.2
2622 Female, age 67, right hemisphere 14.0
2018 Male, age 76, both hemispheres 12.2
2692 Male, age 74, both hemispheres 12.2
1990 Female, age 91, right hemisphere 11.3
2245 Female, age 91, both hemispheres 11.2
2532 Female, age 72, left hemisphere 10.5
1850 Male, age 80, both hemispheres 9.2
1933 Female, age 85, both hemispheres 9.2
2250 Female, age 67, right hemisphere 8.8
Perirhinal gyrus
nTPM: 11.8
2521 Female, age 94, right hemisphere 17.8
1847 Female, age 91, left hemisphere 12.8
1794 Male, age 80, right hemisphere 10.0
2848 Male, age 76, right hemisphere 9.7
1841 Female, age 85, right hemisphere 8.9
Subiculum
nTPM: 11.4
2438 Female, age 94, left hemisphere 16.7
2042 Male, age 76, both hemispheres 11.7
2729 Female, age 91, right hemisphere 11.2
1901 Male, age 80, both hemispheres 11.1
2619 Male, age 74, both hemispheres 9.1
1977 Female, age 85, both hemispheres 8.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.3
Samples: 197

Max nTPM: 17.8
Min nTPM: 4.5
Std nTPM: 2.3
Median nTPM: 10.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 17.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 16.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 16.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 16.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 15.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 15.2
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 15.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 15.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 14.8
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 14.5
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 14.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.0
FF:10169-103B7 60 years, female 18.6
FF:10153-102I9 76 years, female 9.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.0
Pig sample Sample description nTPM
Subiculum
nTPM: 11.6
Samples: 4

Max nTPM: 13.1
Min nTPM: 10.3
Sample A Female 13.1
Sample B Female 10.3
Sample C Male 12.0
Sample D Male 11.1
Dorsal hippocampus
nTPM: 12.0
Samples: 4

Max nTPM: 12.6
Min nTPM: 11.5
Sample A Female 12.2
Sample B Female 12.6
Sample C Male 11.6
Sample D Male 11.5
Entorhinal cortex
nTPM: 10.3
Samples: 4

Max nTPM: 11.9
Min nTPM: 8.7
Sample A Female 11.9
Sample B Female 8.7
Sample C Male 11.2
Sample D Male 9.5
Ventral hippocampus
nTPM: 11.8
Samples: 4

Max nTPM: 14.1
Min nTPM: 10.2
Sample A Female 10.2
Sample B Female 10.7
Sample C Male 14.1
Sample D Male 12.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.4
Samples: 4

Max nTPM: 14.4
Min nTPM: 11.8
Sample A Male 13.8
Sample B Male 13.5
Sample C Female 14.4
Sample D Female 11.8
Hippocampal formation
nTPM: 12.9
Samples: 4

Max nTPM: 14.1
Min nTPM: 11.9
Sample A Male 13.0
Sample B Male 12.7
Sample C Female 11.9
Sample D Female 14.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
71656791 Antisense, RP_050927_04_C11, Mouse strain C57BL/6J (56 days, male) 1.0

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