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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
100.4
nTPM
Monaco:
90.7
nTPM
Schmiedel:
163.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
100.4
HPA sample
nTPM
gdT-cell nTPM: 89.5
Samples: 6
Max nTPM: 111.1
Min nTPM: 65.7
P10809_1007
65.7
P10809_1022
111.1
P10809_1041
72.1
P10809_1060
92.3
P10809_1077
106.5
P10809_1098
89.3
MAIT T-cell nTPM: 78.8
Samples: 6
Max nTPM: 101.3
Min nTPM: 58.9
P10809_1006
58.9
P10809_1024
98.7
P10809_1043
66.3
P10809_1062
78.4
P10809_1083
101.3
P10809_1097
68.9
Memory CD4 T-cell nTPM: 76.8
Samples: 6
Max nTPM: 98.7
Min nTPM: 49.6
P10809_1014
49.6
P10809_1026
93.1
P10809_1045
76.9
P10809_1064
75.2
P10809_1086
98.7
P10809_1113
67.2
Memory CD8 T-cell nTPM: 81.1
Samples: 5
Max nTPM: 96.1
Min nTPM: 63.1
P10809_1012
63.1
P10809_1027
96.1
P10809_1046
90.0
P10809_1065
80.4
P10809_1111
75.8
Naive CD4 T-cell nTPM: 67.8
Samples: 6
Max nTPM: 86.2
Min nTPM: 43.6
P10809_1015
43.6
P10809_1030
63.8
P10809_1049
78.2
P10809_1068
81.2
P10809_1085
86.2
P10809_1112
53.6
Naive CD8 T-cell nTPM: 71.9
Samples: 6
Max nTPM: 97.7
Min nTPM: 45.8
P10809_1016
45.8
P10809_1031
97.7
P10809_1050
66.0
P10809_1069
74.8
P10809_1087
92.4
P10809_1110
54.8
T-reg nTPM: 100.4
Samples: 6
Max nTPM: 131.2
Min nTPM: 71.3
P10809_1018
84.1
P10809_1037
99.2
P10809_1056
71.3
P10809_1075
98.6
P10809_1094
131.2
P10809_1106
117.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
90.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 59.9
Samples: 4
Max nTPM: 71.5
Min nTPM: 43.8
RHH5202_R3573
71.5
RHH5230_R3602
43.8
RHH5259_R3631
55.7
RHH5288_R3660
68.4
Effector memory CD8 T-cell nTPM: 90.7
Samples: 4
Max nTPM: 102.9
Min nTPM: 77.3
RHH5203_R3574
100.7
RHH5231_R3603
77.3
RHH5260_R3632
81.7
RHH5289_R3661
102.9
MAIT T-cell nTPM: 61.2
Samples: 4
Max nTPM: 87.7
Min nTPM: 43.4
RHH5233_R3605
69.9
RHH5205_R3576
87.7
RHH5262_R3634
43.4
RHH5297_R3663
43.9
Memory CD4 T-cell TFH nTPM: 64.2
Samples: 4
Max nTPM: 86.9
Min nTPM: 40.1
RHH5300_R3666
61.0
RHH5236_R3608
40.1
RHH5265_R3637
68.8
RHH5208_R3579
86.9
Memory CD4 T-cell Th1 nTPM: 61.6
Samples: 4
Max nTPM: 79.5
Min nTPM: 32.8
RHH5210_R3581
69.6
RHH5302_R3668
64.3
RHH5238_R3610
32.8
RHH5267_R3639
79.5
Memory CD4 T-cell Th1/Th17 nTPM: 63.5
Samples: 4
Max nTPM: 86.0
Min nTPM: 50.3
RHH5303_R3669
64.4
RHH5211_R3582
86.0
RHH5239_R3611
50.3
RHH5268_R3640
53.4
Memory CD4 T-cell Th17 nTPM: 71.1
Samples: 4
Max nTPM: 74.1
Min nTPM: 63.8
RHH5304_R3670
63.8
RHH5212_R3583
74.1
RHH5240_R3612
73.4
RHH5269_R3641
73.0
Memory CD4 T-cell Th2 nTPM: 71.9
Samples: 4
Max nTPM: 101.7
Min nTPM: 51.7
RHH5305_R3671
51.7
RHH5213_R3584
101.7
RHH5241_R3613
62.5
RHH5270_R3642
71.5
Naive CD4 T-cell nTPM: 55.7
Samples: 4
Max nTPM: 71.9
Min nTPM: 36.1
RHH5306_R3672
50.7
RHH5214_R3585
71.9
RHH5242_R3614
36.1
RHH5271_R3643
64.1
Naive CD8 T-cell nTPM: 41.0
Samples: 4
Max nTPM: 46.6
Min nTPM: 33.2
RHH5201_R3572
44.0
RHH5229_R3601
33.2
RHH5258_R3630
40.0
RHH5287_R3659
46.6
Non-Vd2 gdTCR nTPM: 73.7
Samples: 4
Max nTPM: 98.3
Min nTPM: 55.6
RHH5235_R3607
55.6
RHH5264_R3636
81.1
RHH5207_R3578
98.3
RHH5299_R3665
59.8
T-reg nTPM: 72.1
Samples: 4
Max nTPM: 87.4
Min nTPM: 47.1
RHH5301_R3667
47.1
RHH5237_R3609
87.4
RHH5266_R3638
67.8
RHH5209_R3580
86.1
Terminal effector memory CD4 T-cell nTPM: 72.8
Samples: 2
Max nTPM: 77.3
Min nTPM: 68.3
RHH5243_R3615
77.3
RHH5272_R3644
68.3
Terminal effector memory CD8 T-cell nTPM: 75.8
Samples: 4
Max nTPM: 87.5
Min nTPM: 68.2
RHH5232_R3604
87.5
RHH5204_R3575
77.9
RHH5261_R3633
69.5
RHH5296_R3662
68.2
Vd2 gdTCR nTPM: 67.9
Samples: 4
Max nTPM: 76.6
Min nTPM: 53.1
RHH5234_R3606
72.8
RHH5206_R3577
76.6
RHH5263_R3635
68.9
RHH5298_R3664
53.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
