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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
45.3
nTPM
Monaco:
89.6
nTPM
Schmiedel:
124.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
45.3
HPA sample
nTPM
gdT-cell nTPM: 36.6
Samples: 6
Max nTPM: 43.7
Min nTPM: 28.5
P10809_1007
30.3
P10809_1022
43.7
P10809_1041
38.3
P10809_1060
28.5
P10809_1077
35.2
P10809_1098
43.3
MAIT T-cell nTPM: 38.6
Samples: 6
Max nTPM: 44.7
Min nTPM: 31.2
P10809_1006
41.9
P10809_1024
44.7
P10809_1043
32.3
P10809_1062
39.0
P10809_1083
31.2
P10809_1097
42.3
Memory CD4 T-cell nTPM: 32.7
Samples: 6
Max nTPM: 38.4
Min nTPM: 28.3
P10809_1014
28.3
P10809_1026
31.5
P10809_1045
31.1
P10809_1064
28.5
P10809_1086
38.4
P10809_1113
38.3
Memory CD8 T-cell nTPM: 34.8
Samples: 5
Max nTPM: 40.1
Min nTPM: 28.2
P10809_1012
32.5
P10809_1027
28.2
P10809_1046
40.1
P10809_1065
33.8
P10809_1111
39.4
Naive CD4 T-cell nTPM: 45.3
Samples: 6
Max nTPM: 62.1
Min nTPM: 34.5
P10809_1015
34.5
P10809_1030
53.1
P10809_1049
62.1
P10809_1068
35.0
P10809_1085
45.1
P10809_1112
41.9
Naive CD8 T-cell nTPM: 39.7
Samples: 6
Max nTPM: 46.4
Min nTPM: 33.4
P10809_1016
33.4
P10809_1031
36.7
P10809_1050
39.7
P10809_1069
43.7
P10809_1087
38.5
P10809_1110
46.4
T-reg nTPM: 28.7
Samples: 6
Max nTPM: 35.3
Min nTPM: 24.9
P10809_1018
25.2
P10809_1037
27.5
P10809_1056
35.3
P10809_1075
25.5
P10809_1094
24.9
P10809_1106
33.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
89.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 77.7
Samples: 4
Max nTPM: 107.7
Min nTPM: 53.3
RHH5202_R3573
107.7
RHH5230_R3602
53.3
RHH5259_R3631
75.2
RHH5288_R3660
74.4
Effector memory CD8 T-cell nTPM: 71.0
Samples: 4
Max nTPM: 73.3
Min nTPM: 66.2
RHH5203_R3574
73.3
RHH5231_R3603
66.2
RHH5260_R3632
71.9
RHH5289_R3661
72.7
MAIT T-cell nTPM: 81.0
Samples: 4
Max nTPM: 88.6
Min nTPM: 63.4
RHH5233_R3605
83.3
RHH5205_R3576
88.6
RHH5262_R3634
88.6
RHH5297_R3663
63.4
Memory CD4 T-cell TFH nTPM: 66.1
Samples: 4
Max nTPM: 80.2
Min nTPM: 49.6
RHH5300_R3666
49.6
RHH5236_R3608
73.1
RHH5265_R3637
61.5
RHH5208_R3579
80.2
Memory CD4 T-cell Th1 nTPM: 59.2
Samples: 4
Max nTPM: 74.3
Min nTPM: 50.6
RHH5210_R3581
74.3
RHH5302_R3668
50.6
RHH5238_R3610
56.9
RHH5267_R3639
54.9
Memory CD4 T-cell Th1/Th17 nTPM: 62.1
Samples: 4
Max nTPM: 71.3
Min nTPM: 57.1
RHH5303_R3669
57.1
RHH5211_R3582
62.2
RHH5239_R3611
71.3
RHH5268_R3640
57.6
Memory CD4 T-cell Th17 nTPM: 67.3
Samples: 4
Max nTPM: 75.4
Min nTPM: 54.2
RHH5304_R3670
71.4
RHH5212_R3583
54.2
RHH5240_R3612
68.3
RHH5269_R3641
75.4
Memory CD4 T-cell Th2 nTPM: 71.2
Samples: 4
Max nTPM: 79.5
Min nTPM: 64.7
RHH5305_R3671
64.9
RHH5213_R3584
79.5
RHH5241_R3613
75.8
RHH5270_R3642
64.7
Naive CD4 T-cell nTPM: 80.4
Samples: 4
Max nTPM: 87.9
Min nTPM: 62.7
RHH5306_R3672
62.7
RHH5214_R3585
86.8
RHH5242_R3614
84.0
RHH5271_R3643
87.9
Naive CD8 T-cell nTPM: 88.0
Samples: 4
Max nTPM: 89.9
Min nTPM: 84.9
RHH5201_R3572
89.9
RHH5229_R3601
89.3
RHH5258_R3630
87.9
RHH5287_R3659
84.9
Non-Vd2 gdTCR nTPM: 89.6
Samples: 4
Max nTPM: 106.7
Min nTPM: 66.4
RHH5235_R3607
106.7
RHH5264_R3636
85.1
RHH5207_R3578
100.1
RHH5299_R3665
66.4
T-reg nTPM: 76.6
Samples: 4
Max nTPM: 94.3
Min nTPM: 54.9
RHH5301_R3667
54.9
RHH5237_R3609
79.0
RHH5266_R3638
78.1
RHH5209_R3580
94.3
Terminal effector memory CD4 T-cell nTPM: 71.8
Samples: 2
Max nTPM: 75.5
Min nTPM: 68.1
RHH5243_R3615
68.1
RHH5272_R3644
75.5
Terminal effector memory CD8 T-cell nTPM: 74.3
Samples: 4
Max nTPM: 90.0
Min nTPM: 65.2
RHH5232_R3604
76.6
RHH5204_R3575
90.0
RHH5261_R3633
65.2
RHH5296_R3662
65.2
Vd2 gdTCR nTPM: 82.8
Samples: 4
Max nTPM: 94.0
Min nTPM: 66.8
RHH5234_R3606
77.5
RHH5206_R3577
94.0
RHH5263_R3635
92.7
RHH5298_R3664
66.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
