HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:27.8 nTPM
HPA Brain:43.1 nTPM
GTEx:27.8 nTPM
FANTOM5:75.4 Scaled Tags Per Million
Pig:64.3 nTPM
Mouse:114.5 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036164Antibody HPA036165Antibody CAB022439
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.1
Sample id Sample description nTPM
Hippocampus
nTPM: 37.3
1898 Male, age 80, left hemisphere 47.3
1855 Male, age 76, left hemisphere 37.7
2621 Female, age 67, right hemisphere 37.7
2148 Female, age 91, left hemisphere 35.9
2529 Female, age 94, left hemisphere 34.5
1911 Female, age 85, right hemisphere 30.4
Dentate gyrus
nTPM: 36.1
1927 Female, age 91, both hemispheres 43.5
2010 Male, age 76, both hemispheres 40.1
2246 Female, age 85, both hemispheres 35.1
2528 Male, age 74, both hemispheres 33.9
2530 Female, age 94, left hemisphere 33.9
2531 Female, age 67, both hemispheres 30.0
Entorhinal gyrus
nTPM: 36.2
2764 Male, age 80, right hemisphere 39.4
1938 Female, age 85, left hemisphere 38.7
1787 Male, age 76, left hemisphere 38.1
2613 Female, age 94, left hemisphere 35.7
2117 Female, age 91, right hemisphere 33.4
2686 Male, age 75, right hemisphere 32.0
Hippocampus, CA1
nTPM: 39.1
2749 Male, age 80, left hemisphere 53.1
1873 Female, age 85, both hemispheres 39.7
2527 Male, age 74, both hemispheres 39.6
2082 Female, age 91, right hemisphere 32.1
2045 Male, age 76, both hemispheres 30.9
Hippocampus, CA2
nTPM: 38.2
1892 Male, age 76, both hemispheres 49.8
1963 Male, age 80, left hemisphere 41.9
2249 Male, age 74, both hemispheres 39.1
1940 Female, age 85, left hemisphere 33.8
2437 Female, age 94, left hemisphere 32.7
2113 Female, age 91, right hemisphere 31.7
Hippocampus, CA3
nTPM: 37.9
2436 Male, age 74, both hemispheres 49.7
2137 Male, age 80, left hemisphere 42.4
1867 Male, age 76, both hemispheres 40.7
1891 Female, age 85, both hemispheres 33.2
2620 Female, age 94, left hemisphere 32.9
2861 Female, age 67, both hemispheres 28.4
Parahippocampal cortex
nTPM: 37.9
1850 Male, age 80, both hemispheres 48.9
1990 Female, age 91, right hemisphere 39.2
2532 Female, age 72, left hemisphere 39.0
1933 Female, age 85, both hemispheres 38.3
2245 Female, age 91, both hemispheres 37.8
2250 Female, age 67, right hemisphere 37.4
2693 Female, age 94, both hemispheres 35.6
2692 Male, age 74, both hemispheres 35.5
2018 Male, age 76, both hemispheres 33.9
2622 Female, age 67, right hemisphere 33.8
Perirhinal gyrus
nTPM: 43.1
1847 Female, age 91, left hemisphere 50.9
1794 Male, age 80, right hemisphere 47.0
1841 Female, age 85, right hemisphere 41.2
2848 Male, age 76, right hemisphere 38.3
2521 Female, age 94, right hemisphere 37.9
Subiculum
nTPM: 36.1
1901 Male, age 80, both hemispheres 40.1
2438 Female, age 94, left hemisphere 39.3
2619 Male, age 74, both hemispheres 37.9
1977 Female, age 85, both hemispheres 36.3
2042 Male, age 76, both hemispheres 32.4
2729 Female, age 91, right hemisphere 30.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.8
Samples: 197

Max nTPM: 49.7
Min nTPM: 16.3
Std nTPM: 6.8
Median nTPM: 26.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 49.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 45.8
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 45.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 44.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 44.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 43.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 43.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 42.4
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 42.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 41.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 40.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 75.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 75.4
FF:10169-103B7 60 years, female 89.3
FF:10153-102I9 76 years, female 61.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 64.3
Pig sample Sample description nTPM
Subiculum
nTPM: 59.7
Samples: 4

Max nTPM: 69.4
Min nTPM: 53.9
Sample A Female 69.4
Sample B Female 55.6
Sample C Male 59.9
Sample D Male 53.9
Dorsal hippocampus
nTPM: 61.0
Samples: 4

Max nTPM: 70.3
Min nTPM: 49.5
Sample A Female 70.3
Sample B Female 61.3
Sample C Male 62.9
Sample D Male 49.5
Entorhinal cortex
nTPM: 64.4
Samples: 4

Max nTPM: 70.2
Min nTPM: 56.3
Sample A Female 69.9
Sample B Female 70.2
Sample C Male 61.0
Sample D Male 56.3
Ventral hippocampus
nTPM: 59.6
Samples: 4

Max nTPM: 69.0
Min nTPM: 47.1
Sample A Female 60.1
Sample B Female 47.1
Sample C Male 69.0
Sample D Male 62.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 114.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 110.5
Samples: 4

Max nTPM: 113.0
Min nTPM: 107.3
Sample A Male 107.3
Sample B Male 110.7
Sample C Female 113.0
Sample D Female 110.9
Hippocampal formation
nTPM: 114.5
Samples: 4

Max nTPM: 125.7
Min nTPM: 109.2
Sample A Male 125.7
Sample B Male 111.4
Sample C Female 111.7
Sample D Female 109.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
69735449 Antisense, RP_050503_02_H01, Mouse strain C57BL/6J (56 days, male) 4.7

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