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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
40.5
nTPM
Monaco:
19.0
nTPM
Schmiedel:
49.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
40.5
HPA sample
nTPM
gdT-cell nTPM: 21.4
Samples: 6
Max nTPM: 29.0
Min nTPM: 14.8
P10809_1007
14.8
P10809_1022
19.1
P10809_1041
21.7
P10809_1060
23.2
P10809_1077
29.0
P10809_1098
20.8
MAIT T-cell nTPM: 24.1
Samples: 6
Max nTPM: 30.0
Min nTPM: 17.2
P10809_1006
17.2
P10809_1024
30.0
P10809_1043
21.8
P10809_1062
24.8
P10809_1083
22.8
P10809_1097
27.9
Memory CD4 T-cell nTPM: 32.0
Samples: 6
Max nTPM: 36.6
Min nTPM: 26.7
P10809_1014
26.7
P10809_1026
36.6
P10809_1045
27.9
P10809_1064
30.0
P10809_1086
35.5
P10809_1113
35.3
Memory CD8 T-cell nTPM: 27.9
Samples: 5
Max nTPM: 37.6
Min nTPM: 18.8
P10809_1012
18.8
P10809_1027
37.6
P10809_1046
22.0
P10809_1065
31.0
P10809_1111
30.3
Naive CD4 T-cell nTPM: 37.5
Samples: 6
Max nTPM: 49.2
Min nTPM: 26.9
P10809_1015
26.9
P10809_1030
49.2
P10809_1049
38.9
P10809_1068
42.2
P10809_1085
32.8
P10809_1112
35.2
Naive CD8 T-cell nTPM: 29.8
Samples: 6
Max nTPM: 47.7
Min nTPM: 21.9
P10809_1016
23.7
P10809_1031
21.9
P10809_1050
25.3
P10809_1069
47.7
P10809_1087
30.5
P10809_1110
29.7
T-reg nTPM: 40.5
Samples: 6
Max nTPM: 49.0
Min nTPM: 27.6
P10809_1018
27.6
P10809_1037
48.4
P10809_1056
49.0
P10809_1075
37.3
P10809_1094
45.2
P10809_1106
35.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
19.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 13.8
Samples: 4
Max nTPM: 15.5
Min nTPM: 11.5
RHH5202_R3573
14.9
RHH5230_R3602
13.3
RHH5259_R3631
15.5
RHH5288_R3660
11.5
Effector memory CD8 T-cell nTPM: 13.1
Samples: 4
Max nTPM: 20.9
Min nTPM: 6.4
RHH5203_R3574
12.2
RHH5231_R3603
6.4
RHH5260_R3632
20.9
RHH5289_R3661
13.0
MAIT T-cell nTPM: 10.4
Samples: 4
Max nTPM: 14.6
Min nTPM: 7.2
RHH5233_R3605
14.6
RHH5205_R3576
11.1
RHH5262_R3634
8.7
RHH5297_R3663
7.2
Memory CD4 T-cell TFH nTPM: 16.3
Samples: 4
Max nTPM: 27.5
Min nTPM: 6.6
RHH5300_R3666
15.6
RHH5236_R3608
15.6
RHH5265_R3637
27.5
RHH5208_R3579
6.6
Memory CD4 T-cell Th1 nTPM: 15.4
Samples: 4
Max nTPM: 21.9
Min nTPM: 8.3
RHH5210_R3581
8.3
RHH5302_R3668
21.9
RHH5238_R3610
18.4
RHH5267_R3639
13.0
Memory CD4 T-cell Th1/Th17 nTPM: 11.5
Samples: 4
Max nTPM: 17.0
Min nTPM: 6.7
RHH5303_R3669
12.6
RHH5211_R3582
6.7
RHH5239_R3611
9.6
RHH5268_R3640
17.0
Memory CD4 T-cell Th17 nTPM: 17.0
Samples: 4
Max nTPM: 24.0
Min nTPM: 12.0
RHH5304_R3670
15.4
RHH5212_R3583
16.4
RHH5240_R3612
24.0
RHH5269_R3641
12.0
Memory CD4 T-cell Th2 nTPM: 17.7
Samples: 4
Max nTPM: 21.6
Min nTPM: 16.1
RHH5305_R3671
16.2
RHH5213_R3584
16.8
RHH5241_R3613
21.6
RHH5270_R3642
16.1
Naive CD4 T-cell nTPM: 19.0
Samples: 4
Max nTPM: 23.9
Min nTPM: 12.9
RHH5306_R3672
23.9
RHH5214_R3585
12.9
RHH5242_R3614
17.2
RHH5271_R3643
21.9
Naive CD8 T-cell nTPM: 18.9
Samples: 4
Max nTPM: 20.8
Min nTPM: 15.6
RHH5201_R3572
18.9
RHH5229_R3601
20.8
RHH5258_R3630
15.6
RHH5287_R3659
20.3
Non-Vd2 gdTCR nTPM: 13.7
Samples: 4
Max nTPM: 20.0
Min nTPM: 8.2
RHH5235_R3607
16.3
RHH5264_R3636
20.0
RHH5207_R3578
8.2
RHH5299_R3665
10.3
T-reg nTPM: 16.9
Samples: 4
Max nTPM: 20.9
Min nTPM: 10.8
RHH5301_R3667
10.8
RHH5237_R3609
15.9
RHH5266_R3638
20.9
RHH5209_R3580
20.0
Terminal effector memory CD4 T-cell nTPM: 14.3
Samples: 2
Max nTPM: 15.1
Min nTPM: 13.5
RHH5243_R3615
13.5
RHH5272_R3644
15.1
Terminal effector memory CD8 T-cell nTPM: 10.3
Samples: 4
Max nTPM: 12.2
Min nTPM: 5.7
RHH5232_R3604
5.7
RHH5204_R3575
11.2
RHH5261_R3633
12.2
RHH5296_R3662
12.0
Vd2 gdTCR nTPM: 12.2
Samples: 4
Max nTPM: 18.7
Min nTPM: 4.6
RHH5234_R3606
13.5
RHH5206_R3577
4.6
RHH5263_R3635
18.7
RHH5298_R3664
11.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
