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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
30.7
nTPM
Monaco:
63.7
nTPM
Schmiedel:
63.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
30.7
HPA sample
nTPM
gdT-cell nTPM: 28.2
Samples: 6
Max nTPM: 44.0
Min nTPM: 19.4
P10809_1007
19.4
P10809_1022
26.1
P10809_1041
44.0
P10809_1060
32.2
P10809_1077
25.1
P10809_1098
22.6
MAIT T-cell nTPM: 25.4
Samples: 6
Max nTPM: 31.8
Min nTPM: 17.0
P10809_1006
17.0
P10809_1024
28.6
P10809_1043
21.7
P10809_1062
31.8
P10809_1083
22.4
P10809_1097
31.0
Memory CD4 T-cell nTPM: 24.9
Samples: 6
Max nTPM: 32.0
Min nTPM: 20.0
P10809_1014
21.6
P10809_1026
32.0
P10809_1045
25.9
P10809_1064
24.2
P10809_1086
20.0
P10809_1113
25.8
Memory CD8 T-cell nTPM: 26.4
Samples: 5
Max nTPM: 31.1
Min nTPM: 21.5
P10809_1012
24.9
P10809_1027
21.5
P10809_1046
31.1
P10809_1065
27.2
P10809_1111
27.5
Naive CD4 T-cell nTPM: 28.9
Samples: 6
Max nTPM: 37.8
Min nTPM: 19.8
P10809_1015
19.8
P10809_1030
34.0
P10809_1049
29.4
P10809_1068
27.0
P10809_1085
37.8
P10809_1112
25.4
Naive CD8 T-cell nTPM: 23.0
Samples: 6
Max nTPM: 25.9
Min nTPM: 16.1
P10809_1016
23.5
P10809_1031
25.9
P10809_1050
25.7
P10809_1069
16.1
P10809_1087
21.2
P10809_1110
25.7
T-reg nTPM: 30.7
Samples: 6
Max nTPM: 49.6
Min nTPM: 18.1
P10809_1018
30.8
P10809_1037
18.1
P10809_1056
24.3
P10809_1075
23.1
P10809_1094
38.5
P10809_1106
49.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
63.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 52.7
Samples: 4
Max nTPM: 69.7
Min nTPM: 32.8
RHH5202_R3573
69.7
RHH5230_R3602
32.8
RHH5259_R3631
42.7
RHH5288_R3660
65.6
Effector memory CD8 T-cell nTPM: 54.8
Samples: 4
Max nTPM: 69.5
Min nTPM: 44.4
RHH5203_R3574
59.5
RHH5231_R3603
45.8
RHH5260_R3632
44.4
RHH5289_R3661
69.5
MAIT T-cell nTPM: 46.7
Samples: 4
Max nTPM: 61.2
Min nTPM: 39.4
RHH5233_R3605
39.4
RHH5205_R3576
44.9
RHH5262_R3634
61.2
RHH5297_R3663
41.3
Memory CD4 T-cell TFH nTPM: 45.0
Samples: 4
Max nTPM: 49.9
Min nTPM: 38.0
RHH5300_R3666
38.0
RHH5236_R3608
43.2
RHH5265_R3637
49.9
RHH5208_R3579
48.9
Memory CD4 T-cell Th1 nTPM: 49.8
Samples: 4
Max nTPM: 63.3
Min nTPM: 31.9
RHH5210_R3581
63.3
RHH5302_R3668
52.3
RHH5238_R3610
31.9
RHH5267_R3639
51.5
Memory CD4 T-cell Th1/Th17 nTPM: 48.2
Samples: 4
Max nTPM: 63.8
Min nTPM: 24.9
RHH5303_R3669
56.4
RHH5211_R3582
63.8
RHH5239_R3611
24.9
RHH5268_R3640
47.6
Memory CD4 T-cell Th17 nTPM: 49.6
Samples: 4
Max nTPM: 61.4
Min nTPM: 39.3
RHH5304_R3670
58.0
RHH5212_R3583
61.4
RHH5240_R3612
39.6
RHH5269_R3641
39.3
Memory CD4 T-cell Th2 nTPM: 59.2
Samples: 4
Max nTPM: 67.4
Min nTPM: 49.9
RHH5305_R3671
67.4
RHH5213_R3584
62.1
RHH5241_R3613
57.2
RHH5270_R3642
49.9
Naive CD4 T-cell nTPM: 58.1
Samples: 4
Max nTPM: 69.1
Min nTPM: 45.2
RHH5306_R3672
68.7
RHH5214_R3585
69.1
RHH5242_R3614
49.5
RHH5271_R3643
45.2
Naive CD8 T-cell nTPM: 42.6
Samples: 4
Max nTPM: 56.8
Min nTPM: 20.2
RHH5201_R3572
38.1
RHH5229_R3601
20.2
RHH5258_R3630
55.3
RHH5287_R3659
56.8
Non-Vd2 gdTCR nTPM: 54.0
Samples: 4
Max nTPM: 62.6
Min nTPM: 35.5
RHH5235_R3607
35.5
RHH5264_R3636
58.8
RHH5207_R3578
62.6
RHH5299_R3665
59.2
T-reg nTPM: 63.7
Samples: 4
Max nTPM: 83.1
Min nTPM: 47.5
RHH5301_R3667
58.1
RHH5237_R3609
83.1
RHH5266_R3638
66.0
RHH5209_R3580
47.5
Terminal effector memory CD4 T-cell nTPM: 47.0
Samples: 2
Max nTPM: 48.9
Min nTPM: 45.0
RHH5243_R3615
45.0
RHH5272_R3644
48.9
Terminal effector memory CD8 T-cell nTPM: 53.8
Samples: 4
Max nTPM: 59.7
Min nTPM: 46.1
RHH5232_R3604
51.1
RHH5204_R3575
58.4
RHH5261_R3633
46.1
RHH5296_R3662
59.7
Vd2 gdTCR nTPM: 52.0
Samples: 4
Max nTPM: 63.7
Min nTPM: 36.2
RHH5234_R3606
51.6
RHH5206_R3577
56.3
RHH5263_R3635
36.2
RHH5298_R3664
63.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
