We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
56.9
nTPM
Monaco:
128.2
nTPM
Schmiedel:
97.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
56.9
HPA sample
nTPM
gdT-cell nTPM: 53.3
Samples: 6
Max nTPM: 73.7
Min nTPM: 39.4
P10809_1007
39.4
P10809_1022
73.7
P10809_1041
65.4
P10809_1060
45.9
P10809_1077
39.4
P10809_1098
55.7
MAIT T-cell nTPM: 54.3
Samples: 6
Max nTPM: 79.1
Min nTPM: 44.8
P10809_1006
44.8
P10809_1024
79.1
P10809_1043
44.8
P10809_1062
54.2
P10809_1083
48.0
P10809_1097
54.6
Memory CD4 T-cell nTPM: 55.2
Samples: 6
Max nTPM: 65.9
Min nTPM: 48.9
P10809_1014
48.9
P10809_1026
65.9
P10809_1045
62.7
P10809_1064
49.2
P10809_1086
50.9
P10809_1113
53.8
Memory CD8 T-cell nTPM: 53.0
Samples: 5
Max nTPM: 59.7
Min nTPM: 50.3
P10809_1012
50.4
P10809_1027
59.7
P10809_1046
51.8
P10809_1065
50.3
P10809_1111
52.6
Naive CD4 T-cell nTPM: 53.2
Samples: 6
Max nTPM: 65.2
Min nTPM: 41.4
P10809_1015
41.4
P10809_1030
55.9
P10809_1049
51.6
P10809_1068
53.2
P10809_1085
65.2
P10809_1112
51.8
Naive CD8 T-cell nTPM: 48.6
Samples: 6
Max nTPM: 58.8
Min nTPM: 39.5
P10809_1016
43.3
P10809_1031
44.1
P10809_1050
39.5
P10809_1069
56.6
P10809_1087
49.2
P10809_1110
58.8
T-reg nTPM: 56.9
Samples: 6
Max nTPM: 67.7
Min nTPM: 41.7
P10809_1018
41.7
P10809_1037
56.3
P10809_1056
58.4
P10809_1075
67.7
P10809_1094
62.9
P10809_1106
54.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
128.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 119.1
Samples: 4
Max nTPM: 141.4
Min nTPM: 106.5
RHH5202_R3573
115.6
RHH5230_R3602
112.9
RHH5259_R3631
141.4
RHH5288_R3660
106.5
Effector memory CD8 T-cell nTPM: 110.7
Samples: 4
Max nTPM: 114.8
Min nTPM: 106.0
RHH5203_R3574
112.1
RHH5231_R3603
106.0
RHH5260_R3632
109.8
RHH5289_R3661
114.8
MAIT T-cell nTPM: 87.7
Samples: 4
Max nTPM: 96.8
Min nTPM: 75.8
RHH5233_R3605
75.8
RHH5205_R3576
96.8
RHH5262_R3634
82.5
RHH5297_R3663
95.7
Memory CD4 T-cell TFH nTPM: 102.4
Samples: 4
Max nTPM: 108.1
Min nTPM: 93.7
RHH5300_R3666
108.1
RHH5236_R3608
104.4
RHH5265_R3637
103.2
RHH5208_R3579
93.7
Memory CD4 T-cell Th1 nTPM: 107.6
Samples: 4
Max nTPM: 129.0
Min nTPM: 85.5
RHH5210_R3581
85.5
RHH5302_R3668
98.9
RHH5238_R3610
129.0
RHH5267_R3639
116.9
Memory CD4 T-cell Th1/Th17 nTPM: 128.2
Samples: 4
Max nTPM: 156.7
Min nTPM: 111.3
RHH5303_R3669
128.8
RHH5211_R3582
116.0
RHH5239_R3611
156.7
RHH5268_R3640
111.3
Memory CD4 T-cell Th17 nTPM: 118.1
Samples: 4
Max nTPM: 151.0
Min nTPM: 101.2
RHH5304_R3670
109.2
RHH5212_R3583
101.2
RHH5240_R3612
151.0
RHH5269_R3641
111.0
Memory CD4 T-cell Th2 nTPM: 102.8
Samples: 4
Max nTPM: 114.2
Min nTPM: 91.7
RHH5305_R3671
101.9
RHH5213_R3584
114.2
RHH5241_R3613
91.7
RHH5270_R3642
103.2
Naive CD4 T-cell nTPM: 113.0
Samples: 4
Max nTPM: 155.5
Min nTPM: 95.9
RHH5306_R3672
103.4
RHH5214_R3585
95.9
RHH5242_R3614
155.5
RHH5271_R3643
97.1
Naive CD8 T-cell nTPM: 104.1
Samples: 4
Max nTPM: 122.0
Min nTPM: 95.6
RHH5201_R3572
95.8
RHH5229_R3601
122.0
RHH5258_R3630
102.8
RHH5287_R3659
95.6
Non-Vd2 gdTCR nTPM: 106.1
Samples: 4
Max nTPM: 135.4
Min nTPM: 87.2
RHH5235_R3607
135.4
RHH5264_R3636
104.0
RHH5207_R3578
87.2
RHH5299_R3665
97.6
T-reg nTPM: 111.9
Samples: 4
Max nTPM: 141.2
Min nTPM: 89.3
RHH5301_R3667
89.3
RHH5237_R3609
141.2
RHH5266_R3638
108.0
RHH5209_R3580
109.0
Terminal effector memory CD4 T-cell nTPM: 104.6
Samples: 2
Max nTPM: 109.8
Min nTPM: 99.4
RHH5243_R3615
109.8
RHH5272_R3644
99.4
Terminal effector memory CD8 T-cell nTPM: 103.9
Samples: 4
Max nTPM: 134.4
Min nTPM: 78.6
RHH5232_R3604
106.4
RHH5204_R3575
78.6
RHH5261_R3633
96.2
RHH5296_R3662
134.4
Vd2 gdTCR nTPM: 99.9
Samples: 4
Max nTPM: 108.6
Min nTPM: 78.9
RHH5234_R3606
108.6
RHH5206_R3577
105.8
RHH5263_R3635
106.4
RHH5298_R3664
78.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
