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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
59.2
nTPM
Monaco:
86.3
nTPM
Schmiedel:
45.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
59.2
HPA sample
nTPM
gdT-cell nTPM: 36.4
Samples: 6
Max nTPM: 46.7
Min nTPM: 22.7
P10809_1007
22.7
P10809_1022
46.7
P10809_1041
34.8
P10809_1060
35.5
P10809_1077
35.1
P10809_1098
43.7
MAIT T-cell nTPM: 45.9
Samples: 6
Max nTPM: 70.0
Min nTPM: 21.0
P10809_1006
21.0
P10809_1024
70.0
P10809_1043
49.4
P10809_1062
41.1
P10809_1083
53.4
P10809_1097
40.4
Memory CD4 T-cell nTPM: 44.0
Samples: 6
Max nTPM: 55.8
Min nTPM: 32.6
P10809_1014
33.7
P10809_1026
55.8
P10809_1045
43.7
P10809_1064
32.6
P10809_1086
53.5
P10809_1113
44.9
Memory CD8 T-cell nTPM: 36.2
Samples: 5
Max nTPM: 43.6
Min nTPM: 22.2
P10809_1012
22.2
P10809_1027
43.6
P10809_1046
37.7
P10809_1065
38.4
P10809_1111
39.3
Naive CD4 T-cell nTPM: 59.2
Samples: 6
Max nTPM: 90.6
Min nTPM: 41.5
P10809_1015
41.5
P10809_1030
90.6
P10809_1049
61.5
P10809_1068
50.7
P10809_1085
56.7
P10809_1112
54.2
Naive CD8 T-cell nTPM: 50.1
Samples: 6
Max nTPM: 61.7
Min nTPM: 44.9
P10809_1016
45.6
P10809_1031
61.7
P10809_1050
55.9
P10809_1069
45.0
P10809_1087
47.5
P10809_1110
44.9
T-reg nTPM: 36.8
Samples: 6
Max nTPM: 41.4
Min nTPM: 31.0
P10809_1018
31.0
P10809_1037
34.4
P10809_1056
38.4
P10809_1075
35.1
P10809_1094
40.3
P10809_1106
41.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
86.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 64.4
Samples: 4
Max nTPM: 76.3
Min nTPM: 48.9
RHH5202_R3573
76.3
RHH5230_R3602
56.1
RHH5259_R3631
48.9
RHH5288_R3660
76.3
Effector memory CD8 T-cell nTPM: 73.3
Samples: 4
Max nTPM: 102.3
Min nTPM: 53.7
RHH5203_R3574
65.8
RHH5231_R3603
71.4
RHH5260_R3632
53.7
RHH5289_R3661
102.3
MAIT T-cell nTPM: 76.8
Samples: 4
Max nTPM: 103.1
Min nTPM: 54.4
RHH5233_R3605
103.1
RHH5205_R3576
54.4
RHH5262_R3634
70.9
RHH5297_R3663
78.8
Memory CD4 T-cell TFH nTPM: 81.4
Samples: 4
Max nTPM: 100.4
Min nTPM: 54.8
RHH5300_R3666
71.8
RHH5236_R3608
98.6
RHH5265_R3637
54.8
RHH5208_R3579
100.4
Memory CD4 T-cell Th1 nTPM: 59.8
Samples: 4
Max nTPM: 82.1
Min nTPM: 39.9
RHH5210_R3581
63.4
RHH5302_R3668
82.1
RHH5238_R3610
53.7
RHH5267_R3639
39.9
Memory CD4 T-cell Th1/Th17 nTPM: 70.1
Samples: 4
Max nTPM: 101.0
Min nTPM: 49.8
RHH5303_R3669
101.0
RHH5211_R3582
63.0
RHH5239_R3611
66.6
RHH5268_R3640
49.8
Memory CD4 T-cell Th17 nTPM: 53.3
Samples: 4
Max nTPM: 61.4
Min nTPM: 44.0
RHH5304_R3670
61.4
RHH5212_R3583
56.4
RHH5240_R3612
51.3
RHH5269_R3641
44.0
Memory CD4 T-cell Th2 nTPM: 70.0
Samples: 4
Max nTPM: 82.1
Min nTPM: 61.7
RHH5305_R3671
64.1
RHH5213_R3584
72.2
RHH5241_R3613
82.1
RHH5270_R3642
61.7
Naive CD4 T-cell nTPM: 68.7
Samples: 4
Max nTPM: 78.1
Min nTPM: 58.9
RHH5306_R3672
68.4
RHH5214_R3585
78.1
RHH5242_R3614
69.2
RHH5271_R3643
58.9
Naive CD8 T-cell nTPM: 86.3
Samples: 4
Max nTPM: 121.0
Min nTPM: 52.5
RHH5201_R3572
121.0
RHH5229_R3601
52.5
RHH5258_R3630
85.9
RHH5287_R3659
85.8
Non-Vd2 gdTCR nTPM: 65.8
Samples: 4
Max nTPM: 78.4
Min nTPM: 51.2
RHH5235_R3607
51.2
RHH5264_R3636
71.5
RHH5207_R3578
78.4
RHH5299_R3665
61.9
T-reg nTPM: 64.1
Samples: 4
Max nTPM: 72.5
Min nTPM: 59.6
RHH5301_R3667
61.6
RHH5237_R3609
62.8
RHH5266_R3638
59.6
RHH5209_R3580
72.5
Terminal effector memory CD4 T-cell nTPM: 74.1
Samples: 2
Max nTPM: 87.3
Min nTPM: 60.9
RHH5243_R3615
60.9
RHH5272_R3644
87.3
Terminal effector memory CD8 T-cell nTPM: 76.9
Samples: 4
Max nTPM: 98.2
Min nTPM: 57.3
RHH5232_R3604
87.3
RHH5204_R3575
64.8
RHH5261_R3633
57.3
RHH5296_R3662
98.2
Vd2 gdTCR nTPM: 80.7
Samples: 4
Max nTPM: 93.4
Min nTPM: 73.8
RHH5234_R3606
80.9
RHH5206_R3577
93.4
RHH5263_R3635
73.8
RHH5298_R3664
74.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
