HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:280.4 nTPM
HPA Brain:366.1 nTPM
GTEx:280.4 nTPM
FANTOM5:485.8 Scaled Tags Per Million
Pig:294.8 nTPM
Mouse:378.8 nTPM
Allen mouse:15.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065682
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 366.1
Sample id Sample description nTPM
Hippocampus
nTPM: 349.5
1898 Male, age 80, left hemisphere 415.0
2621 Female, age 67, right hemisphere 396.0
1855 Male, age 76, left hemisphere 357.4
2148 Female, age 91, left hemisphere 340.5
2529 Female, age 94, left hemisphere 310.9
1911 Female, age 85, right hemisphere 277.3
Dentate gyrus
nTPM: 335.2
2530 Female, age 94, left hemisphere 388.7
1927 Female, age 91, both hemispheres 339.3
2531 Female, age 67, both hemispheres 328.7
2010 Male, age 76, both hemispheres 323.6
2528 Male, age 74, both hemispheres 318.4
2246 Female, age 85, both hemispheres 312.6
Entorhinal gyrus
nTPM: 355.0
2764 Male, age 80, right hemisphere 398.9
1938 Female, age 85, left hemisphere 363.7
2613 Female, age 94, left hemisphere 357.4
2686 Male, age 75, right hemisphere 356.1
1787 Male, age 76, left hemisphere 343.5
2117 Female, age 91, right hemisphere 310.6
Hippocampus, CA1
nTPM: 340.2
2749 Male, age 80, left hemisphere 443.2
1873 Female, age 85, both hemispheres 351.8
2045 Male, age 76, both hemispheres 341.2
2527 Male, age 74, both hemispheres 306.1
2082 Female, age 91, right hemisphere 258.9
Hippocampus, CA2
nTPM: 316.3
1892 Male, age 76, both hemispheres 383.7
1963 Male, age 80, left hemisphere 334.4
2437 Female, age 94, left hemisphere 322.3
1940 Female, age 85, left hemisphere 297.5
2113 Female, age 91, right hemisphere 283.1
2249 Male, age 74, both hemispheres 276.5
Hippocampus, CA3
nTPM: 358.5
2861 Female, age 67, both hemispheres 455.6
2620 Female, age 94, left hemisphere 412.1
2137 Male, age 80, left hemisphere 395.7
1867 Male, age 76, both hemispheres 310.7
2436 Male, age 74, both hemispheres 291.0
1891 Female, age 85, both hemispheres 285.9
Parahippocampal cortex
nTPM: 340.9
2245 Female, age 91, both hemispheres 403.6
1850 Male, age 80, both hemispheres 402.4
2622 Female, age 67, right hemisphere 377.1
2532 Female, age 72, left hemisphere 365.9
2692 Male, age 74, both hemispheres 341.1
1933 Female, age 85, both hemispheres 330.8
1990 Female, age 91, right hemisphere 315.0
2693 Female, age 94, both hemispheres 311.2
2250 Female, age 67, right hemisphere 293.6
2018 Male, age 76, both hemispheres 268.5
Perirhinal gyrus
nTPM: 366.1
1794 Male, age 80, right hemisphere 426.4
1841 Female, age 85, right hemisphere 374.5
1847 Female, age 91, left hemisphere 370.6
2848 Male, age 76, right hemisphere 346.7
2521 Female, age 94, right hemisphere 312.1
Subiculum
nTPM: 315.9
2619 Male, age 74, both hemispheres 342.9
1901 Male, age 80, both hemispheres 339.8
2438 Female, age 94, left hemisphere 325.6
1977 Female, age 85, both hemispheres 311.1
2042 Male, age 76, both hemispheres 306.7
2729 Female, age 91, right hemisphere 269.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 280.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 280.4
Samples: 197

Max nTPM: 470.9
Min nTPM: 138.7
Std nTPM: 65.5
Median nTPM: 274.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 470.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 456.0
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 446.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 435.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 435.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 428.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 421.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 421.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 414.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 412.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 412.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 485.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 485.8
FF:10169-103B7 60 years, female 539.0
FF:10153-102I9 76 years, female 432.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 294.8
Pig sample Sample description nTPM
Subiculum
nTPM: 244.8
Samples: 4

Max nTPM: 316.8
Min nTPM: 215.5
Sample A Female 316.8
Sample B Female 215.5
Sample C Male 231.3
Sample D Male 215.6
Dorsal hippocampus
nTPM: 294.8
Samples: 4

Max nTPM: 381.6
Min nTPM: 243.3
Sample A Female 381.6
Sample B Female 297.1
Sample C Male 257.2
Sample D Male 243.3
Entorhinal cortex
nTPM: 254.4
Samples: 4

Max nTPM: 292.1
Min nTPM: 236.1
Sample A Female 292.1
Sample B Female 252.8
Sample C Male 236.5
Sample D Male 236.1
Ventral hippocampus
nTPM: 288.0
Samples: 4

Max nTPM: 351.3
Min nTPM: 194.8
Sample A Female 281.1
Sample B Female 194.8
Sample C Male 324.8
Sample D Male 351.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 378.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 360.4
Samples: 4

Max nTPM: 393.4
Min nTPM: 344.0
Sample A Male 349.2
Sample B Male 354.8
Sample C Female 344.0
Sample D Female 393.4
Hippocampal formation
nTPM: 378.8
Samples: 4

Max nTPM: 406.0
Min nTPM: 352.7
Sample A Male 352.7
Sample B Male 362.5
Sample C Female 406.0
Sample D Female 394.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.1
69013750 Antisense, RP_050309_02_H09, Mouse strain C57BL/6J (56 days, male) 15.1

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