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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
77.6
nTPM
Monaco:
202.1
nTPM
Schmiedel:
106.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
77.6
HPA sample
nTPM
gdT-cell nTPM: 53.8
Samples: 6
Max nTPM: 57.8
Min nTPM: 47.7
P10809_1007
57.8
P10809_1022
55.1
P10809_1041
54.9
P10809_1060
47.7
P10809_1077
51.2
P10809_1098
55.9
MAIT T-cell nTPM: 59.1
Samples: 6
Max nTPM: 75.6
Min nTPM: 47.8
P10809_1006
75.6
P10809_1024
47.8
P10809_1043
52.3
P10809_1062
55.4
P10809_1083
62.4
P10809_1097
61.3
Memory CD4 T-cell nTPM: 59.7
Samples: 6
Max nTPM: 69.6
Min nTPM: 45.7
P10809_1014
69.6
P10809_1026
69.3
P10809_1045
60.4
P10809_1064
45.7
P10809_1086
49.7
P10809_1113
63.5
Memory CD8 T-cell nTPM: 54.5
Samples: 5
Max nTPM: 63.8
Min nTPM: 44.4
P10809_1012
63.8
P10809_1027
47.3
P10809_1046
57.1
P10809_1065
44.4
P10809_1111
60.0
Naive CD4 T-cell nTPM: 55.9
Samples: 6
Max nTPM: 63.8
Min nTPM: 41.5
P10809_1015
62.4
P10809_1030
45.9
P10809_1049
41.5
P10809_1068
63.8
P10809_1085
61.4
P10809_1112
60.4
Naive CD8 T-cell nTPM: 47.6
Samples: 6
Max nTPM: 61.3
Min nTPM: 38.8
P10809_1016
61.3
P10809_1031
38.8
P10809_1050
43.0
P10809_1069
50.1
P10809_1087
45.4
P10809_1110
46.9
T-reg nTPM: 77.6
Samples: 6
Max nTPM: 97.2
Min nTPM: 50.5
P10809_1018
88.3
P10809_1037
64.7
P10809_1056
97.2
P10809_1075
50.5
P10809_1094
83.7
P10809_1106
81.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
202.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 151.1
Samples: 4
Max nTPM: 181.8
Min nTPM: 106.8
RHH5202_R3573
147.7
RHH5230_R3602
181.8
RHH5259_R3631
106.8
RHH5288_R3660
168.1
Effector memory CD8 T-cell nTPM: 190.0
Samples: 4
Max nTPM: 198.7
Min nTPM: 183.2
RHH5203_R3574
183.2
RHH5231_R3603
189.1
RHH5260_R3632
188.8
RHH5289_R3661
198.7
MAIT T-cell nTPM: 181.5
Samples: 4
Max nTPM: 219.3
Min nTPM: 150.5
RHH5233_R3605
219.3
RHH5205_R3576
175.2
RHH5262_R3634
180.9
RHH5297_R3663
150.5
Memory CD4 T-cell TFH nTPM: 197.8
Samples: 4
Max nTPM: 219.8
Min nTPM: 142.2
RHH5300_R3666
142.2
RHH5236_R3608
219.8
RHH5265_R3637
219.3
RHH5208_R3579
209.7
Memory CD4 T-cell Th1 nTPM: 151.1
Samples: 4
Max nTPM: 168.7
Min nTPM: 138.9
RHH5210_R3581
168.7
RHH5302_R3668
145.9
RHH5238_R3610
138.9
RHH5267_R3639
150.7
Memory CD4 T-cell Th1/Th17 nTPM: 179.5
Samples: 4
Max nTPM: 202.5
Min nTPM: 138.1
RHH5303_R3669
202.5
RHH5211_R3582
198.2
RHH5239_R3611
138.1
RHH5268_R3640
179.1
Memory CD4 T-cell Th17 nTPM: 202.1
Samples: 4
Max nTPM: 234.5
Min nTPM: 159.8
RHH5304_R3670
221.8
RHH5212_R3583
192.4
RHH5240_R3612
234.5
RHH5269_R3641
159.8
Memory CD4 T-cell Th2 nTPM: 200.1
Samples: 4
Max nTPM: 227.0
Min nTPM: 162.2
RHH5305_R3671
162.2
RHH5213_R3584
227.0
RHH5241_R3613
223.9
RHH5270_R3642
187.4
Naive CD4 T-cell nTPM: 168.0
Samples: 4
Max nTPM: 175.6
Min nTPM: 161.1
RHH5306_R3672
161.1
RHH5214_R3585
175.6
RHH5242_R3614
171.8
RHH5271_R3643
163.3
Naive CD8 T-cell nTPM: 135.2
Samples: 4
Max nTPM: 167.7
Min nTPM: 84.8
RHH5201_R3572
167.7
RHH5229_R3601
84.8
RHH5258_R3630
147.9
RHH5287_R3659
140.4
Non-Vd2 gdTCR nTPM: 189.3
Samples: 4
Max nTPM: 216.9
Min nTPM: 147.3
RHH5235_R3607
216.9
RHH5264_R3636
211.8
RHH5207_R3578
181.1
RHH5299_R3665
147.3
T-reg nTPM: 181.8
Samples: 4
Max nTPM: 233.8
Min nTPM: 139.1
RHH5301_R3667
169.5
RHH5237_R3609
233.8
RHH5266_R3638
139.1
RHH5209_R3580
184.9
Terminal effector memory CD4 T-cell nTPM: 169.0
Samples: 2
Max nTPM: 176.8
Min nTPM: 161.1
RHH5243_R3615
161.1
RHH5272_R3644
176.8
Terminal effector memory CD8 T-cell nTPM: 177.1
Samples: 4
Max nTPM: 211.2
Min nTPM: 153.7
RHH5232_R3604
183.7
RHH5204_R3575
153.7
RHH5261_R3633
159.8
RHH5296_R3662
211.2
Vd2 gdTCR nTPM: 199.8
Samples: 4
Max nTPM: 247.7
Min nTPM: 163.3
RHH5234_R3606
247.7
RHH5206_R3577
175.6
RHH5263_R3635
212.4
RHH5298_R3664
163.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
