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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
353.1
nTPM
FANTOM5:
277.0
Scaled Tags Per Million
Pig:
4.7
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
353.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 293.4
2090
Male, age 80, both hemispheres
313.2
2301
Female, age 85, both hemispheres
292.4
2188
Female, age 91, both hemispheres
285.8
1984
Male, age 76, both hemispheres
282.1
Dorsal cochlear nucleus nTPM: 287.2
2058
Male, age 76, both hemispheres
316.5
2370
Male, age 61, both hemispheres
308.2
2187
Female, age 91, both hemispheres
289.8
2378
Male, age 80, both hemispheres
264.6
2802
Male, age 74, right hemisphere
256.8
Dorsal tegmental nucleus nTPM: 336.5
2358
Male, age 61, both hemispheres
386.8
2083
Male, age 80, both hemispheres
365.3
1936
Male, age 76, left hemisphere
298.1
2326
Male, age 74, both hemispheres
296.0
Dorsolateral tegmental area nTPM: 353.1
2337
Male, age 61, both hemispheres
502.1
2654
Male, age 80, both hemispheres
373.8
2360
Male, age 74, both hemispheres
322.1
2751
Female, age 85, both hemispheres
303.8
2141
Male, age 76, both hemispheres
263.9
Kolliker-Fuse nucleus nTPM: 317.1
2315
Male, age 76, right hemisphere
415.4
2163
Male, age 80, both hemispheres
286.2
2793
Female, age 91, left hemisphere
249.7
Lateral lemniscal nuclei nTPM: 221.9
2746
Female, age 85, left hemisphere
268.2
2320
Female, age 91, left hemisphere
252.6
2453
Male, age 74, right hemisphere
235.2
2169
Male, age 76, both hemispheres
179.8
2036
Male, age 80, both hemispheres
173.5
Lateral parabrachial nucleus nTPM: 311.4
2790
Male, age 61, both hemispheres
345.7
2792
Male, age 76, both hemispheres
330.5
2013
Male, age 80, both hemispheres
309.2
2139
Female, age 85, right hemisphere
260.1
Lateral vestibular nucleus nTPM: 270.5
2311
Male, age 80, both hemispheres
288.6
2184
Male, age 76, both hemispheres
252.4
Locus coeruleus nTPM: 225.9
2162
Male, age 80, both hemispheres
276.1
2123
Female, age 91, both hemispheres
275.9
1980
Male, age 76, both hemispheres
272.5
2317
Female, age 72, unknown
249.4
2014
Male, age 55, unknown
208.3
2720
Male, age 74, both hemispheres
170.4
2788
Male, age 74, unknown
128.6
Medial parabrachial nucleus nTPM: 318.4
2156
Male, age 61, both hemispheres
420.8
2463
Female, age 85, right hemisphere
407.7
2170
Female, age 91, both hemispheres
272.5
2786
Male, age 76, both hemispheres
263.8
2854
Male, age 80, both hemispheres
227.1
Medial periolivary nuclei nTPM: 243.3
2081
Male, age 80, both hemispheres
311.2
2791
Male, age 74, right hemisphere
259.1
2458
Female, age 91, both hemispheres
240.3
2063
Male, age 76, both hemispheres
216.9
2171
Female, age 85, both hemispheres
188.9
Motor facial nucleus nTPM: 242.7
2126
Male, age 61, both hemispheres
325.7
2365
Male, age 74, right hemisphere
253.8
2795
Female, age 91, both hemispheres
227.6
2697
Female, age 85, both hemispheres
219.7
2062
Male, age 76, both hemispheres
219.1
2327
Male, age 80, both hemispheres
210.2
Motor trigeminal nucleus nTPM: 275.1
2335
Male, age 61, both hemispheres
300.2
2560
Male, age 74, both hemispheres
289.8
2321
Female, age 91, both hemispheres
273.6
2079
Male, age 80, both hemispheres
270.0
2309
Male, age 76, both hemispheres
242.1
Nuclei of the trapezoid body nTPM: 234.7
1983
Male, age 76, both hemispheres
264.5
2368
Female, age 91, both hemispheres
257.6
2166
Male, age 80, both hemispheres
257.1
2159
Male, age 61, both hemispheres
201.3
2735
Female, age 85, both hemispheres
193.0
Nucleus raphe magnus nTPM: 229.5
2455
Male, age 74, both hemispheres
260.3
2459
Female, age 91, both hemispheres
251.5
2328
Male, age 80, both hemispheres
242.3
2051
Male, age 76, both hemispheres
228.9
2172
Female, age 85, both hemispheres
202.0
2160
Male, age 61, both hemispheres
192.2
Paramedian reticular nucleus nTPM: 252.1
2057
Male, age 80, both hemispheres
314.3
2313
Male, age 61, both hemispheres
284.5
2050
Female, age 85, both hemispheres
206.4
2052
Male, age 76, both hemispheres
203.2
Pedunculopontine tegmental nucleus nTPM: 310.2
2338
Male, age 61, both hemispheres
337.5
2334
Male, age 80, both hemispheres
301.6
1921
Female, age 85, both hemispheres
291.6
Pontine nuclei nTPM: 273.9
2454
Male, age 74, left hemisphere
321.8
2115
Male, age 80, left hemisphere
297.1
2787
Female, age 85, both hemispheres
295.5
1863
Male, age 55, unknown
276.9
2109
Female, age 72, unknown
269.8
2319
Female, age 91, both hemispheres
265.2
1968
Male, age 76, left hemisphere
232.6
2727
Male, age 61, right hemisphere
232.5
Pontine raphe nucleus nTPM: 265.2
2122
Female, age 85, midline
279.2
2853
Male, age 76, midline
251.1
Posteroventral cochlear nucleus nTPM: 281.5
2371
Male, age 61, both hemispheres
305.7
2752
Female, age 85, both hemispheres
295.3
2135
Female, age 91, both hemispheres
283.5
2070
Male, age 76, both hemispheres
280.3
2341
Male, age 80, both hemispheres
242.9
Principal sensory trigeminal nucleus nTPM: 236.7
2324
Male, age 76, both hemispheres
265.6
2367
Female, age 91, left hemisphere
251.3
2008
Male, age 80, left hemisphere
233.4
2158
Male, age 61, both hemispheres
196.4
Reticular pontine nucleus, caudal nTPM: 262.1
2559
Male, age 74, both hemispheres
311.1
2457
Female, age 91, both hemispheres
258.0
2092
Male, age 76, both hemispheres
246.8
2332
Male, age 80, right hemisphere
232.7
Reticular pontine nucleus, oral nTPM: 292.9
1939
Male, age 80, both hemispheres
354.1
2366
Female, age 91, both hemispheres
306.0
2167
Male, age 76, both hemispheres
288.6
2361
Male, age 74, both hemispheres
265.9
2012
Female, age 85, both hemispheres
249.9
Reticulotegmental nucleus nTPM: 266.8
2333
Male, age 80, both hemispheres
316.2
2452
Male, age 74, both hemispheres
283.1
2322
Female, age 91, both hemispheres
259.0
2325
Male, age 76, both hemispheres
208.8
Spinal trigeminal nucleus, oral nTPM: 276.1
2737
Female, age 85, both hemispheres
291.0
1978
Male, age 76, both hemispheres
271.1
2164
Male, age 80, both hemispheres
266.3
Subcoeruleus area nTPM: 267.9
2369
Female, age 85, left hemisphere
315.8
2451
Male, age 74, both hemispheres
274.7
2323
Female, age 91, left hemisphere
274.1
1958
Male, age 80, both hemispheres
253.1
2089
Male, age 76, left hemisphere
221.7
Superior olive nTPM: 246.4
2364
Male, age 74, right hemisphere
285.2
2561
Female, age 91, both hemispheres
257.4
2020
Male, age 76, both hemispheres
250.4
2329
Male, age 80, right hemisphere
224.2
1875
Female, age 85, both hemispheres
215.0
Ventral periolivary nuclei nTPM: 207.9
2165
Male, age 80, both hemispheres
235.8
2023
Male, age 76, both hemispheres
230.5
2130
Female, age 85, both hemispheres
183.4
2794
Female, age 91, left hemisphere
182.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 291.1
2359
Male, age 61, both hemispheres
496.5
2456
Female, age 91, both hemispheres
279.4
2161
Male, age 80, both hemispheres
253.7
2449
Male, age 74, both hemispheres
252.1
2840
Female, age 85, both hemispheres
233.9
1959
Male, age 76, both hemispheres
231.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
