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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
3008.3
nTPM
Monaco:
1221.1
nTPM
Schmiedel:
885.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
3008.3
HPA sample
nTPM
gdT-cell nTPM: 2621.1
Samples: 6
Max nTPM: 4166.7
Min nTPM: 1207.6
P10809_1007
1207.6
P10809_1022
2869.4
P10809_1041
4166.7
P10809_1060
2226.3
P10809_1077
2086.5
P10809_1098
3170.0
MAIT T-cell nTPM: 2488.3
Samples: 6
Max nTPM: 3639.2
Min nTPM: 986.9
P10809_1006
986.9
P10809_1024
2867.7
P10809_1043
3639.2
P10809_1062
2436.3
P10809_1083
1991.7
P10809_1097
3007.7
Memory CD4 T-cell nTPM: 2482.0
Samples: 6
Max nTPM: 3230.3
Min nTPM: 1085.2
P10809_1014
1085.2
P10809_1026
2977.0
P10809_1045
3230.3
P10809_1064
2609.0
P10809_1086
2362.9
P10809_1113
2627.4
Memory CD8 T-cell nTPM: 2480.0
Samples: 5
Max nTPM: 3133.5
Min nTPM: 1190.6
P10809_1012
1190.6
P10809_1027
2564.4
P10809_1046
3133.5
P10809_1065
2755.9
P10809_1111
2755.5
Naive CD4 T-cell nTPM: 2645.4
Samples: 6
Max nTPM: 4754.0
Min nTPM: 846.2
P10809_1015
846.2
P10809_1030
2715.5
P10809_1049
4754.0
P10809_1068
2178.6
P10809_1085
2754.1
P10809_1112
2623.9
Naive CD8 T-cell nTPM: 2180.5
Samples: 6
Max nTPM: 2695.8
Min nTPM: 803.9
P10809_1016
803.9
P10809_1031
2411.1
P10809_1050
2695.8
P10809_1069
2626.8
P10809_1087
2312.7
P10809_1110
2232.6
T-reg nTPM: 3008.3
Samples: 6
Max nTPM: 5127.8
Min nTPM: 1156.7
P10809_1018
1156.7
P10809_1037
2715.4
P10809_1056
5127.8
P10809_1075
2544.4
P10809_1094
3039.9
P10809_1106
3465.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1221.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 894.9
Samples: 4
Max nTPM: 1097.5
Min nTPM: 586.6
RHH5202_R3573
1097.5
RHH5230_R3602
1059.3
RHH5259_R3631
586.6
RHH5288_R3660
836.2
Effector memory CD8 T-cell nTPM: 1043.2
Samples: 4
Max nTPM: 1243.9
Min nTPM: 744.3
RHH5203_R3574
1243.9
RHH5231_R3603
1062.6
RHH5260_R3632
744.3
RHH5289_R3661
1121.9
MAIT T-cell nTPM: 1097.8
Samples: 4
Max nTPM: 1273.5
Min nTPM: 876.6
RHH5233_R3605
1186.1
RHH5205_R3576
1273.5
RHH5262_R3634
876.6
RHH5297_R3663
1055.0
Memory CD4 T-cell TFH nTPM: 1007.6
Samples: 4
Max nTPM: 1411.2
Min nTPM: 727.2
RHH5300_R3666
771.2
RHH5236_R3608
1411.2
RHH5265_R3637
727.2
RHH5208_R3579
1120.7
Memory CD4 T-cell Th1 nTPM: 819.2
Samples: 4
Max nTPM: 1043.0
Min nTPM: 603.0
RHH5210_R3581
1043.0
RHH5302_R3668
868.0
RHH5238_R3610
762.9
RHH5267_R3639
603.0
Memory CD4 T-cell Th1/Th17 nTPM: 931.1
Samples: 4
Max nTPM: 1318.7
Min nTPM: 632.2
RHH5303_R3669
1089.7
RHH5211_R3582
1318.7
RHH5239_R3611
683.6
RHH5268_R3640
632.2
Memory CD4 T-cell Th17 nTPM: 846.9
Samples: 4
Max nTPM: 1207.3
Min nTPM: 537.2
RHH5304_R3670
762.4
RHH5212_R3583
1207.3
RHH5240_R3612
880.7
RHH5269_R3641
537.2
Memory CD4 T-cell Th2 nTPM: 889.9
Samples: 4
Max nTPM: 1143.1
Min nTPM: 642.1
RHH5305_R3671
786.6
RHH5213_R3584
1143.1
RHH5241_R3613
987.8
RHH5270_R3642
642.1
Naive CD4 T-cell nTPM: 843.9
Samples: 4
Max nTPM: 1268.3
Min nTPM: 618.4
RHH5306_R3672
708.0
RHH5214_R3585
1268.3
RHH5242_R3614
780.9
RHH5271_R3643
618.4
Naive CD8 T-cell nTPM: 649.5
Samples: 4
Max nTPM: 850.1
Min nTPM: 543.4
RHH5201_R3572
850.1
RHH5229_R3601
543.4
RHH5258_R3630
605.8
RHH5287_R3659
598.8
Non-Vd2 gdTCR nTPM: 997.0
Samples: 4
Max nTPM: 1154.7
Min nTPM: 931.1
RHH5235_R3607
944.0
RHH5264_R3636
931.1
RHH5207_R3578
1154.7
RHH5299_R3665
958.1
T-reg nTPM: 999.8
Samples: 4
Max nTPM: 1340.6
Min nTPM: 645.0
RHH5301_R3667
858.3
RHH5237_R3609
1340.6
RHH5266_R3638
645.0
RHH5209_R3580
1155.2
Terminal effector memory CD4 T-cell nTPM: 791.7
Samples: 2
Max nTPM: 817.2
Min nTPM: 766.2
RHH5243_R3615
817.2
RHH5272_R3644
766.2
Terminal effector memory CD8 T-cell nTPM: 1069.4
Samples: 4
Max nTPM: 1440.5
Min nTPM: 771.9
RHH5232_R3604
1072.4
RHH5204_R3575
1440.5
RHH5261_R3633
771.9
RHH5296_R3662
992.6
Vd2 gdTCR nTPM: 1221.1
Samples: 4
Max nTPM: 1575.1
Min nTPM: 955.2
RHH5234_R3606
1250.2
RHH5206_R3577
1575.1
RHH5263_R3635
955.2
RHH5298_R3664
1103.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.