HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:36.8 nTPM
HPA Brain:62.2 nTPM
GTEx:36.8 nTPM
FANTOM5:184.8 Scaled Tags Per Million
Pig:70.3 nTPM
Mouse:59.5 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063298
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 62.2
Sample id Sample description nTPM
Hippocampus
nTPM: 57.2
1911 Female, age 85, right hemisphere 61.7
2621 Female, age 67, right hemisphere 61.4
1898 Male, age 80, left hemisphere 58.7
2148 Female, age 91, left hemisphere 55.1
1855 Male, age 76, left hemisphere 54.6
2529 Female, age 94, left hemisphere 51.4
Dentate gyrus
nTPM: 56.3
2246 Female, age 85, both hemispheres 62.4
2531 Female, age 67, both hemispheres 62.4
2010 Male, age 76, both hemispheres 58.2
1927 Female, age 91, both hemispheres 55.3
2528 Male, age 74, both hemispheres 54.3
2530 Female, age 94, left hemisphere 45.4
Entorhinal gyrus
nTPM: 58.1
2613 Female, age 94, left hemisphere 63.6
1938 Female, age 85, left hemisphere 63.5
2764 Male, age 80, right hemisphere 56.7
2117 Female, age 91, right hemisphere 56.6
2686 Male, age 75, right hemisphere 55.9
1787 Male, age 76, left hemisphere 52.2
Hippocampus, CA1
nTPM: 59.8
2749 Male, age 80, left hemisphere 66.9
2045 Male, age 76, both hemispheres 61.3
1873 Female, age 85, both hemispheres 59.4
2527 Male, age 74, both hemispheres 56.1
2082 Female, age 91, right hemisphere 55.1
Hippocampus, CA2
nTPM: 55.1
1892 Male, age 76, both hemispheres 60.8
1940 Female, age 85, left hemisphere 57.3
2249 Male, age 74, both hemispheres 56.8
2113 Female, age 91, right hemisphere 55.4
1963 Male, age 80, left hemisphere 53.9
2437 Female, age 94, left hemisphere 46.4
Hippocampus, CA3
nTPM: 61.1
2137 Male, age 80, left hemisphere 69.4
2436 Male, age 74, both hemispheres 65.7
1867 Male, age 76, both hemispheres 63.1
2620 Female, age 94, left hemisphere 59.6
1891 Female, age 85, both hemispheres 55.1
2861 Female, age 67, both hemispheres 53.7
Parahippocampal cortex
nTPM: 61.5
2622 Female, age 67, right hemisphere 65.5
2693 Female, age 94, both hemispheres 64.8
2018 Male, age 76, both hemispheres 64.6
1850 Male, age 80, both hemispheres 63.9
1933 Female, age 85, both hemispheres 62.0
2245 Female, age 91, both hemispheres 61.7
2532 Female, age 72, left hemisphere 59.2
2250 Female, age 67, right hemisphere 58.9
2692 Male, age 74, both hemispheres 57.4
1990 Female, age 91, right hemisphere 57.0
Perirhinal gyrus
nTPM: 62.2
1841 Female, age 85, right hemisphere 68.5
1794 Male, age 80, right hemisphere 62.8
2521 Female, age 94, right hemisphere 61.9
2848 Male, age 76, right hemisphere 60.7
1847 Female, age 91, left hemisphere 57.4
Subiculum
nTPM: 59.3
2438 Female, age 94, left hemisphere 69.6
1901 Male, age 80, both hemispheres 62.4
1977 Female, age 85, both hemispheres 58.3
2042 Male, age 76, both hemispheres 58.0
2619 Male, age 74, both hemispheres 54.7
2729 Female, age 91, right hemisphere 52.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.8
Samples: 197

Max nTPM: 58.7
Min nTPM: 23.0
Std nTPM: 6.4
Median nTPM: 36.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 58.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 55.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 54.5
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 50.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 50.2
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 50.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 49.3
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 48.9
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 48.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 48.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 47.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 184.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 184.8
FF:10169-103B7 60 years, female 184.8
FF:10153-102I9 76 years, female 184.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.3
Pig sample Sample description nTPM
Subiculum
nTPM: 67.5
Samples: 4

Max nTPM: 70.7
Min nTPM: 64.6
Sample A Female 70.7
Sample B Female 67.5
Sample C Male 64.6
Sample D Male 67.3
Dorsal hippocampus
nTPM: 64.8
Samples: 4

Max nTPM: 69.5
Min nTPM: 58.3
Sample A Female 68.5
Sample B Female 62.7
Sample C Male 69.5
Sample D Male 58.3
Entorhinal cortex
nTPM: 70.3
Samples: 4

Max nTPM: 79.9
Min nTPM: 63.3
Sample A Female 63.3
Sample B Female 79.9
Sample C Male 68.6
Sample D Male 69.5
Ventral hippocampus
nTPM: 58.3
Samples: 4

Max nTPM: 65.8
Min nTPM: 45.0
Sample A Female 65.5
Sample B Female 65.8
Sample C Male 45.0
Sample D Male 56.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.6
Samples: 4

Max nTPM: 70.8
Min nTPM: 46.7
Sample A Male 46.7
Sample B Male 70.8
Sample C Female 66.0
Sample D Female 47.0
Hippocampal formation
nTPM: 59.5
Samples: 4

Max nTPM: 64.7
Min nTPM: 47.4
Sample A Male 62.7
Sample B Male 64.7
Sample C Female 47.4
Sample D Female 63.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
74277436 Antisense, RP_051130_03_E08, Mouse strain C57BL/6J (56 days, male) 2.6

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