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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
61.4
nTPM
Monaco:
171.5
nTPM
Schmiedel:
264.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
61.4
HPA sample
nTPM
gdT-cell nTPM: 44.6
Samples: 6
Max nTPM: 57.3
Min nTPM: 36.8
P10809_1007
39.5
P10809_1022
42.9
P10809_1041
38.5
P10809_1060
52.7
P10809_1077
57.3
P10809_1098
36.8
MAIT T-cell nTPM: 51.3
Samples: 6
Max nTPM: 73.0
Min nTPM: 30.9
P10809_1006
30.9
P10809_1024
58.8
P10809_1043
45.7
P10809_1062
54.6
P10809_1083
73.0
P10809_1097
44.9
Memory CD4 T-cell nTPM: 47.6
Samples: 6
Max nTPM: 60.0
Min nTPM: 34.1
P10809_1014
34.1
P10809_1026
51.7
P10809_1045
44.8
P10809_1064
60.0
P10809_1086
52.2
P10809_1113
43.0
Memory CD8 T-cell nTPM: 44.0
Samples: 5
Max nTPM: 52.2
Min nTPM: 34.9
P10809_1012
34.9
P10809_1027
48.4
P10809_1046
41.3
P10809_1065
52.2
P10809_1111
43.2
Naive CD4 T-cell nTPM: 61.4
Samples: 6
Max nTPM: 73.6
Min nTPM: 44.8
P10809_1015
44.8
P10809_1030
68.9
P10809_1049
67.4
P10809_1068
73.6
P10809_1085
64.8
P10809_1112
48.8
Naive CD8 T-cell nTPM: 48.9
Samples: 6
Max nTPM: 56.1
Min nTPM: 41.7
P10809_1016
41.8
P10809_1031
56.1
P10809_1050
54.5
P10809_1069
50.0
P10809_1087
49.2
P10809_1110
41.7
T-reg nTPM: 49.8
Samples: 6
Max nTPM: 69.8
Min nTPM: 36.3
P10809_1018
36.3
P10809_1037
52.3
P10809_1056
44.2
P10809_1075
69.8
P10809_1094
53.7
P10809_1106
42.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
171.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 126.3
Samples: 4
Max nTPM: 136.1
Min nTPM: 110.7
RHH5202_R3573
124.6
RHH5230_R3602
133.6
RHH5259_R3631
136.1
RHH5288_R3660
110.7
Effector memory CD8 T-cell nTPM: 121.3
Samples: 4
Max nTPM: 137.3
Min nTPM: 108.8
RHH5203_R3574
123.4
RHH5231_R3603
108.8
RHH5260_R3632
115.8
RHH5289_R3661
137.3
MAIT T-cell nTPM: 118.1
Samples: 4
Max nTPM: 135.1
Min nTPM: 94.0
RHH5233_R3605
133.7
RHH5205_R3576
135.1
RHH5262_R3634
109.6
RHH5297_R3663
94.0
Memory CD4 T-cell TFH nTPM: 126.5
Samples: 4
Max nTPM: 137.8
Min nTPM: 109.4
RHH5300_R3666
109.4
RHH5236_R3608
130.7
RHH5265_R3637
137.8
RHH5208_R3579
127.9
Memory CD4 T-cell Th1 nTPM: 121.2
Samples: 4
Max nTPM: 135.8
Min nTPM: 96.9
RHH5210_R3581
133.3
RHH5302_R3668
96.9
RHH5238_R3610
135.8
RHH5267_R3639
118.7
Memory CD4 T-cell Th1/Th17 nTPM: 140.0
Samples: 4
Max nTPM: 155.1
Min nTPM: 130.6
RHH5303_R3669
130.6
RHH5211_R3582
136.5
RHH5239_R3611
155.1
RHH5268_R3640
137.7
Memory CD4 T-cell Th17 nTPM: 127.1
Samples: 4
Max nTPM: 164.3
Min nTPM: 100.2
RHH5304_R3670
117.8
RHH5212_R3583
100.2
RHH5240_R3612
164.3
RHH5269_R3641
125.9
Memory CD4 T-cell Th2 nTPM: 119.6
Samples: 4
Max nTPM: 123.3
Min nTPM: 116.2
RHH5305_R3671
116.2
RHH5213_R3584
123.3
RHH5241_R3613
116.4
RHH5270_R3642
122.4
Naive CD4 T-cell nTPM: 161.5
Samples: 4
Max nTPM: 178.8
Min nTPM: 130.9
RHH5306_R3672
130.9
RHH5214_R3585
177.8
RHH5242_R3614
158.4
RHH5271_R3643
178.8
Naive CD8 T-cell nTPM: 171.6
Samples: 4
Max nTPM: 188.8
Min nTPM: 147.5
RHH5201_R3572
166.2
RHH5229_R3601
188.8
RHH5258_R3630
147.5
RHH5287_R3659
183.7
Non-Vd2 gdTCR nTPM: 104.7
Samples: 4
Max nTPM: 133.4
Min nTPM: 79.1
RHH5235_R3607
133.4
RHH5264_R3636
95.2
RHH5207_R3578
110.9
RHH5299_R3665
79.1
T-reg nTPM: 133.0
Samples: 4
Max nTPM: 157.1
Min nTPM: 105.5
RHH5301_R3667
105.5
RHH5237_R3609
157.1
RHH5266_R3638
125.8
RHH5209_R3580
143.7
Terminal effector memory CD4 T-cell nTPM: 112.8
Samples: 2
Max nTPM: 121.9
Min nTPM: 103.6
RHH5243_R3615
121.9
RHH5272_R3644
103.6
Terminal effector memory CD8 T-cell nTPM: 95.5
Samples: 4
Max nTPM: 107.6
Min nTPM: 71.7
RHH5232_R3604
101.1
RHH5204_R3575
71.7
RHH5261_R3633
107.6
RHH5296_R3662
101.5
Vd2 gdTCR nTPM: 110.6
Samples: 4
Max nTPM: 133.1
Min nTPM: 87.5
RHH5234_R3606
124.6
RHH5206_R3577
87.5
RHH5263_R3635
133.1
RHH5298_R3664
97.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
