HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:30.4 nTPM
HPA Brain:28.3 nTPM
GTEx:30.4 nTPM
FANTOM5:41.1 Scaled Tags Per Million
Pig:14.8 nTPM
Mouse:12.1 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021425Antibody HPA024423
Glial cells Not detectedNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.3
Sample id Sample description nTPM
Hippocampus
nTPM: 25.6
1898 Male, age 80, left hemisphere 28.9
2148 Female, age 91, left hemisphere 28.3
1855 Male, age 76, left hemisphere 27.5
2529 Female, age 94, left hemisphere 23.6
2621 Female, age 67, right hemisphere 22.8
1911 Female, age 85, right hemisphere 22.5
Dentate gyrus
nTPM: 25.0
1927 Female, age 91, both hemispheres 27.2
2010 Male, age 76, both hemispheres 25.9
2528 Male, age 74, both hemispheres 24.8
2530 Female, age 94, left hemisphere 24.7
2531 Female, age 67, both hemispheres 24.3
2246 Female, age 85, both hemispheres 23.3
Entorhinal gyrus
nTPM: 27.1
2764 Male, age 80, right hemisphere 30.3
2613 Female, age 94, left hemisphere 29.7
1938 Female, age 85, left hemisphere 29.3
1787 Male, age 76, left hemisphere 28.2
2117 Female, age 91, right hemisphere 25.5
2686 Male, age 75, right hemisphere 19.5
Hippocampus, CA1
nTPM: 27.6
2749 Male, age 80, left hemisphere 38.1
1873 Female, age 85, both hemispheres 26.0
2527 Male, age 74, both hemispheres 25.6
2045 Male, age 76, both hemispheres 24.6
2082 Female, age 91, right hemisphere 23.6
Hippocampus, CA2
nTPM: 27.0
1963 Male, age 80, left hemisphere 32.9
1892 Male, age 76, both hemispheres 28.7
2249 Male, age 74, both hemispheres 27.0
1940 Female, age 85, left hemisphere 25.2
2113 Female, age 91, right hemisphere 25.1
2437 Female, age 94, left hemisphere 23.0
Hippocampus, CA3
nTPM: 26.2
2137 Male, age 80, left hemisphere 31.3
2620 Female, age 94, left hemisphere 27.6
2436 Male, age 74, both hemispheres 25.9
1867 Male, age 76, both hemispheres 25.3
1891 Female, age 85, both hemispheres 24.3
2861 Female, age 67, both hemispheres 22.5
Parahippocampal cortex
nTPM: 25.4
1850 Male, age 80, both hemispheres 29.6
1933 Female, age 85, both hemispheres 28.1
1990 Female, age 91, right hemisphere 27.4
2245 Female, age 91, both hemispheres 25.9
2622 Female, age 67, right hemisphere 25.5
2250 Female, age 67, right hemisphere 24.7
2692 Male, age 74, both hemispheres 24.7
2532 Female, age 72, left hemisphere 23.3
2693 Female, age 94, both hemispheres 22.8
2018 Male, age 76, both hemispheres 22.4
Perirhinal gyrus
nTPM: 28.3
1847 Female, age 91, left hemisphere 34.0
1794 Male, age 80, right hemisphere 30.0
2521 Female, age 94, right hemisphere 28.0
1841 Female, age 85, right hemisphere 25.2
2848 Male, age 76, right hemisphere 24.1
Subiculum
nTPM: 26.2
1977 Female, age 85, both hemispheres 28.8
2438 Female, age 94, left hemisphere 27.7
1901 Male, age 80, both hemispheres 26.7
2619 Male, age 74, both hemispheres 25.6
2729 Female, age 91, right hemisphere 24.7
2042 Male, age 76, both hemispheres 24.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.4
Samples: 197

Max nTPM: 50.0
Min nTPM: 15.1
Std nTPM: 6.1
Median nTPM: 29.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 50.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 47.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 46.4
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 45.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 42.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 42.5
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 42.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 41.9
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 41.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 41.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 40.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.1
FF:10169-103B7 60 years, female 50.8
FF:10153-102I9 76 years, female 31.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.8
Pig sample Sample description nTPM
Subiculum
nTPM: 13.5
Samples: 4

Max nTPM: 16.9
Min nTPM: 11.5
Sample A Female 16.9
Sample B Female 12.6
Sample C Male 12.9
Sample D Male 11.5
Dorsal hippocampus
nTPM: 14.8
Samples: 4

Max nTPM: 17.5
Min nTPM: 12.5
Sample A Female 17.5
Sample B Female 14.4
Sample C Male 14.8
Sample D Male 12.5
Entorhinal cortex
nTPM: 12.3
Samples: 4

Max nTPM: 13.8
Min nTPM: 10.1
Sample A Female 13.3
Sample B Female 11.9
Sample C Male 13.8
Sample D Male 10.1
Ventral hippocampus
nTPM: 14.5
Samples: 4

Max nTPM: 18.5
Min nTPM: 9.6
Sample A Female 14.4
Sample B Female 9.6
Sample C Male 18.5
Sample D Male 15.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.0
Samples: 4

Max nTPM: 12.0
Min nTPM: 9.9
Sample A Male 9.9
Sample B Male 12.0
Sample C Female 11.0
Sample D Female 11.1
Hippocampal formation
nTPM: 12.2
Samples: 4

Max nTPM: 12.8
Min nTPM: 11.1
Sample A Male 11.1
Sample B Male 12.8
Sample C Female 12.1
Sample D Female 12.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
69672120 Antisense, RP_050428_03_A10, Mouse strain C57BL/6J (56 days, male) 0.7

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