We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
20.7
nTPM
Monaco:
19.9
nTPM
Schmiedel:
34.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
20.7
HPA sample
nTPM
gdT-cell nTPM: 17.5
Samples: 6
Max nTPM: 38.6
Min nTPM: 9.6
P10809_1007
9.6
P10809_1022
20.1
P10809_1041
38.6
P10809_1060
11.0
P10809_1077
10.0
P10809_1098
15.8
MAIT T-cell nTPM: 20.7
Samples: 6
Max nTPM: 29.1
Min nTPM: 10.5
P10809_1006
19.3
P10809_1024
29.1
P10809_1043
25.5
P10809_1062
26.8
P10809_1083
13.1
P10809_1097
10.5
Memory CD4 T-cell nTPM: 12.1
Samples: 6
Max nTPM: 14.7
Min nTPM: 9.2
P10809_1014
9.2
P10809_1026
14.7
P10809_1045
11.0
P10809_1064
12.0
P10809_1086
12.5
P10809_1113
13.3
Memory CD8 T-cell nTPM: 15.7
Samples: 5
Max nTPM: 18.6
Min nTPM: 12.2
P10809_1012
13.0
P10809_1027
18.6
P10809_1046
17.2
P10809_1065
12.2
P10809_1111
17.6
Naive CD4 T-cell nTPM: 17.6
Samples: 6
Max nTPM: 26.9
Min nTPM: 10.4
P10809_1015
10.4
P10809_1030
20.4
P10809_1049
26.9
P10809_1068
20.2
P10809_1085
12.9
P10809_1112
15.0
Naive CD8 T-cell nTPM: 16.0
Samples: 6
Max nTPM: 20.4
Min nTPM: 13.1
P10809_1016
14.6
P10809_1031
17.6
P10809_1050
15.9
P10809_1069
14.3
P10809_1087
13.1
P10809_1110
20.4
T-reg nTPM: 15.9
Samples: 6
Max nTPM: 26.2
Min nTPM: 5.1
P10809_1018
20.7
P10809_1037
14.2
P10809_1056
10.6
P10809_1075
5.1
P10809_1094
18.8
P10809_1106
26.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
19.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 14.1
Samples: 4
Max nTPM: 18.2
Min nTPM: 6.9
RHH5202_R3573
6.9
RHH5230_R3602
18.2
RHH5259_R3631
17.1
RHH5288_R3660
14.2
Effector memory CD8 T-cell nTPM: 14.8
Samples: 4
Max nTPM: 21.6
Min nTPM: 5.0
RHH5203_R3574
5.0
RHH5231_R3603
14.8
RHH5260_R3632
17.8
RHH5289_R3661
21.6
MAIT T-cell nTPM: 18.3
Samples: 4
Max nTPM: 30.7
Min nTPM: 8.8
RHH5233_R3605
8.8
RHH5205_R3576
12.2
RHH5262_R3634
21.4
RHH5297_R3663
30.7
Memory CD4 T-cell TFH nTPM: 9.3
Samples: 4
Max nTPM: 13.5
Min nTPM: 7.0
RHH5300_R3666
13.5
RHH5236_R3608
7.7
RHH5265_R3637
7.0
RHH5208_R3579
9.0
Memory CD4 T-cell Th1 nTPM: 11.6
Samples: 4
Max nTPM: 16.1
Min nTPM: 8.5
RHH5210_R3581
10.4
RHH5302_R3668
16.1
RHH5238_R3610
8.5
RHH5267_R3639
11.3
Memory CD4 T-cell Th1/Th17 nTPM: 15.0
Samples: 4
Max nTPM: 20.6
Min nTPM: 4.9
RHH5303_R3669
17.5
RHH5211_R3582
20.6
RHH5239_R3611
4.9
RHH5268_R3640
16.9
Memory CD4 T-cell Th17 nTPM: 12.7
Samples: 4
Max nTPM: 17.0
Min nTPM: 3.4
RHH5304_R3670
3.4
RHH5212_R3583
16.6
RHH5240_R3612
13.6
RHH5269_R3641
17.0
Memory CD4 T-cell Th2 nTPM: 20.0
Samples: 4
Max nTPM: 26.2
Min nTPM: 15.9
RHH5305_R3671
15.9
RHH5213_R3584
19.9
RHH5241_R3613
17.8
RHH5270_R3642
26.2
Naive CD4 T-cell nTPM: 16.6
Samples: 4
Max nTPM: 28.6
Min nTPM: 6.9
RHH5306_R3672
16.0
RHH5214_R3585
6.9
RHH5242_R3614
14.7
RHH5271_R3643
28.6
Naive CD8 T-cell nTPM: 10.8
Samples: 4
Max nTPM: 15.1
Min nTPM: 3.3
RHH5201_R3572
15.1
RHH5229_R3601
3.3
RHH5258_R3630
15.1
RHH5287_R3659
9.6
Non-Vd2 gdTCR nTPM: 7.9
Samples: 4
Max nTPM: 11.1
Min nTPM: 2.0
RHH5235_R3607
2.0
RHH5264_R3636
11.1
RHH5207_R3578
10.0
RHH5299_R3665
8.6
T-reg nTPM: 11.0
Samples: 4
Max nTPM: 15.8
Min nTPM: 4.0
RHH5301_R3667
4.0
RHH5237_R3609
14.9
RHH5266_R3638
15.8
RHH5209_R3580
9.2
Terminal effector memory CD4 T-cell nTPM: 10.2
Samples: 2
Max nTPM: 10.5
Min nTPM: 9.8
RHH5243_R3615
10.5
RHH5272_R3644
9.8
Terminal effector memory CD8 T-cell nTPM: 7.9
Samples: 4
Max nTPM: 10.6
Min nTPM: 2.1
RHH5232_R3604
2.1
RHH5204_R3575
8.8
RHH5261_R3633
10.2
RHH5296_R3662
10.6
Vd2 gdTCR nTPM: 15.5
Samples: 4
Max nTPM: 20.3
Min nTPM: 7.8
RHH5234_R3606
7.8
RHH5206_R3577
20.3
RHH5263_R3635
17.2
RHH5298_R3664
16.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
